G297247


Basic Information

Item Value
gene id G297247
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172828.1
NCBI id APWO02000046.1
chromosome length 5964967
location 3357656 ~ 3359095 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU408786
aagacctcaaataatgcaaagaaaacaagttcatattcataaagttttaagagttcagaaatcaatatttggtggaataaccctggtttttaatcagttttcatgcatcttggcatgttctcctccaccagtcttacacactgcttttggataactttatgctgctttactcctggtgcaaaaattcaaccaGTTCGGTttgatttgatggtttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU408786 True 215 lncRNA 0.35 2 3357656 3359095

Neighbor

gene id symbol gene type direction distance location
LOC103026382 LOC108432046,LOC107719342,LOC107602308,LOC107672125,LOC107672690 coding downstream 296939 3046230 ~ 3060717 (-)
LOC111191031 NA coding downstream 412542 2943850 ~ 2945114 (-)
mfsd6l NA coding downstream 863881 2489837 ~ 2493775 (-)
trnas-gcu_70 NA coding downstream 1061129 2296446 ~ 2296527 (-)
trnas-gcu_69 NA coding downstream 1061348 2296227 ~ 2296308 (-)
gcdh gcdh,LOC102209187,LOC102794743,LOC101471797,LOC107718595 coding upstream 295282 3654377 ~ 3675494 (-)
LOC103031051 NA coding upstream 321403 3680498 ~ 3699508 (-)
LOC111191029 NA coding upstream 408700 3767795 ~ 3781254 (-)
LOC111191032 NA coding upstream 541075 3900170 ~ 3901948 (-)
LOC103029048 NA coding upstream 555078 3914173 ~ 3931118 (-)
G297241 ddx5,LOC103024726,LOC108432077,LOC107583258,LOC107723600,LOC107602339,LOC103393708,LOC100712452 non-coding downstream 15376 3338230 ~ 3342280 (-)
G297239 NA non-coding downstream 26673 3326852 ~ 3330983 (-)
G297209 NA non-coding downstream 45138 3305860 ~ 3312518 (-)
G297196 NA non-coding downstream 84729 3267245 ~ 3272927 (-)
G297191 NA non-coding downstream 139047 3217520 ~ 3218609 (-)
LOC111191057 NA non-coding upstream 34053 3393148 ~ 3504242 (-)
G297264 NA non-coding upstream 52167 3411262 ~ 3412048 (-)
G297274 NA non-coding upstream 119421 3478516 ~ 3479496 (-)
G297282 NA non-coding upstream 148371 3507466 ~ 3507689 (-)
G297322 NA non-coding upstream 190879 3549974 ~ 3585287 (-)
G297195 kpna2,LOC108432045,LOC108261381 other downstream 130485 3224207 ~ 3227171 (-)
LOC103037146 NA other downstream 826154 2497215 ~ 2531502 (-)
LOC111191047 NA other downstream 1499834 1845913 ~ 1857822 (-)
LOC107197178 syngr1a,LOC108413620,LOC107582870,LOC107694963,LOC107727456,LOC107684634,LOC107725053,LOC107590782 other downstream 1968947 1371515 ~ 1388709 (-)
G297334 farsa,LOC106601350 other upstream 237392 3596487 ~ 3610695 (-)
elof1 elof1,LOC101167459 other upstream 993520 4352615 ~ 4355768 (-)
G297720 NA other upstream 1006482 4365577 ~ 4366130 (-)
LOC103025426 zgc:158403,LOC108441004,LOC108258290,LOC107718630,LOC107661656,LOC107553678,LOC107695678 other upstream 1716396 5075491 ~ 5112720 (-)
LOC103032059 coro7,LOC108431934,LOC108276516,LOC107553663 other upstream 2113701 5472796 ~ 5655479 (-)

Expression


Co-expression Network