G297720


Basic Information

Item Value
gene id G297720
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172828.1
NCBI id APWO02000046.1
chromosome length 5964967
location 4365577 ~ 4366130 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU409466
ttggacaatgaaactggaacacctgtcattttagtgtgggaggtttcatggctaaattggagcagcctggtggccaatcttcattaattgcacattgcaccagtaagagcagagtgtgaaggttcaattagcagggtaagagcacagttttactccaaatattgcaatgcacacaacattatgggtgacataccagagttcaaaagaggacaaattgttggtgcatgtcttgctggagcatctgtgaccaagacagcaagtctttgtgatgtatcaagagccacggtatccagggtaatgtcagcataccaccaagaaggaccaaccacatccaacaggattaactgtggacgctgtaagaggaagctgtctgaaagggatgttcgggtgctaacccggattgtatccaaaaaacataaaaccatggctgatcaaatcacgcagaattcaatgtgcacctcaactctcctgtttccaccagaactgtccgtcaccacaatcaattattgtggtctaaaaccaggtgtttcagtttcattgtccaacccctgtag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU409466 True 554 TUCP 0.44 1 4365577 4366130

Neighbor

gene id symbol gene type direction distance location
LOC103026684 NA coding downstream 296704 4023006 ~ 4068873 (-)
LOC103029673 NA coding downstream 347952 4009287 ~ 4017625 (-)
LOC103029354 NA coding downstream 410716 3948097 ~ 3954861 (-)
LOC103029048 NA coding downstream 434459 3914173 ~ 3931118 (-)
LOC111191032 NA coding downstream 463629 3900170 ~ 3901948 (-)
swsap1 NA coding upstream 48961 4415091 ~ 4418619 (-)
dhps dhps,LOC107563249,LOC107661880 coding upstream 333346 4699476 ~ 4707428 (-)
fbxw9 fbxw9,LOC107661857 coding upstream 347722 4713852 ~ 4726084 (-)
LOC103025737 nfix,nfixb,LOC107718575,LOC107661654,LOC107715650,LOC107553634 coding upstream 435080 4801210 ~ 5038826 (-)
LOC103031169 LOC108435881,LOC107665693,LOC107548722,LOC108279991,LOC107743034 coding upstream 804262 5170392 ~ 5187553 (-)
G297703 NA non-coding downstream 15979 4254207 ~ 4349598 (-)
G297704 LOC108440983,LOC108258030 non-coding downstream 73326 4291102 ~ 4292251 (-)
G297470 NA non-coding downstream 251595 4106308 ~ 4113982 (-)
G297465 NA non-coding downstream 318210 4041598 ~ 4047367 (-)
G297459 NA non-coding downstream 376584 3988443 ~ 3988993 (-)
G297736 NA non-coding upstream 67465 4433595 ~ 4434460 (-)
G297738 NA non-coding upstream 69878 4436008 ~ 4436596 (-)
G297755 NA non-coding upstream 114284 4480414 ~ 4481039 (-)
G297765 NA non-coding upstream 151429 4517559 ~ 4605850 (-)
G297764 NA non-coding upstream 175553 4541683 ~ 4602730 (-)
elof1 elof1,LOC101167459 other downstream 9809 4352615 ~ 4355768 (-)
G297334 farsa,LOC106601350 other downstream 754882 3596487 ~ 3610695 (-)
G297195 kpna2,LOC108432045,LOC108261381 other downstream 1138406 3224207 ~ 3227171 (-)
LOC103037146 NA other downstream 1834075 2497215 ~ 2531502 (-)
LOC111191047 NA other downstream 2507755 1845913 ~ 1857822 (-)
LOC103025426 zgc:158403,LOC108441004,LOC108258290,LOC107718630,LOC107661656,LOC107553678,LOC107695678 other upstream 709361 5075491 ~ 5112720 (-)
LOC103032059 coro7,LOC108431934,LOC108276516,LOC107553663 other upstream 1106666 5472796 ~ 5655479 (-)
G297905 NA other upstream 1235958 5602088 ~ 5602948 (-)

Expression


Co-expression Network