tmem205 (tmem205)


Basic Information

Item Value
gene id tmem205
gene name tmem205
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172828.1
NCBI id APWO02000046.1
chromosome length 5964967
location 4356987 ~ 4363604 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022665078.1
GGGGGCGTGGCTACGCGGGAGGTGCCGTTTGTGCAACAAGGGAAATGCACATTCGCCTAAACAGCGAGGATTAACCCCAGAATTTCAGCTAAAGGAGAAATACAGCAGGACTTTACCATGGCCACTGAAGGGGACCCGTCAGACCTGGTGAAGGTGCTTCACCTGCTGGTGATGTCCTTCTCTTGGGGGATGCAGGTGTGGGTGTCCTTCATCGCAGGGTTTGTGCTGGTGTCTCAGGTGACTCTGCACACGTTTGGTTTGGTGCAGAGTAAACTCTTCCCCTGGTATTTCTACTGCCTGCTGGGCAGCAACACGGTCAGCCTGGCCATATATGCAGTGTATCATCCCAGGGAACTGCTGGACTGGCACGAGGCTATACAGATGACCCTGTTCTTTGTGGCAGTGATCATGGCAGGGCTGAATGCTCAGTGGTTCGGACCCGCTGTCACTGAGAACATGCTGGTGATGAGGGGGATCGAGCAGGAGCACGGTTTGGGTGGAGAAGTGGGCTTTGGAACCAACAGGGAGAGCTACGTTAAACTCCGCGAGCAGGACCCCAAATACAAAACCCACCGGACCAGCTTCTACCGCTACCACGGCCTGTCCAACCTGAGCAACCTGGTGGGCTTTGTCTGCAGCACCGTCAACCTCGTCTACCTTGCCCTTCAGCTGGCTTCACTATGAGACCAGTTCTGTCTTTAACGTGAAGCAGATTGAATGGtagtatttctcttttttttctaaactttatttctatttttatccccaatttagctaggtccattgtcccacccattcttCTGCTAACCAGCtgttactcagctgtatatcccccatcactagtgatgccacaacaccaggagggtgaagactagcatgactccgcctcttttcaaactgctgctgatgcagcattgccgagtagcatcacagcgctaacgctctgaggaaagcgcagcaactcggttctgatacatcagctcacagatgcagccttgtgctgatccacatcaccctaggagtaatgagggaaaagagcgccatctactgtacccacccagagagaataAGCAAgacctattgtgctctctcagggctccggcagctgatggcaagctgcatgactgggattggAACAGCGatttcccaatcatagtggcagcgcttagcccttCCTGTGATTTTGTAATTCCCATTAGGACTGTGCACCACACACTAATTCATTCACAGTTCATTCCATATCAATCAAACGATGGGACAGGTGAAAACAATTGATGATTTGAAATGTATGTATTACATtagtatgtaaatatattacttCTAAACAGGTTTATTAATGTACTTTGTATAACTAATGTGTATATAGTGAGATTTTAGAATGAGTCTGGTCGAGGGGCCATTTTAGTTTCTGAAACTTTGGATACACTGATTTAAGTGCCTACTTTTCCCTCTTGGCCTAATGAATGTTCTATATACTATCAAACTACAACACACTactacaaccccaaatcagttGAAGCTAAtcagacaaaatgtaaaaaaatatatttggttcATACactttacatacattttaaataaattacaatttgatttttagcatttttagatGGATCTcaattatttagttagttagtttctACTTATGTTGCGTATGCATTGATgtgtatttgctttttttccaagtttgtAATCATGATGGTTaatttgtagaaaataaatacatttttctaaatcTGA

Function

symbol description
tmem205 Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in blood cell and vascular endothelium. Orthologous to human TMEM205 (transmembrane protein 205).

NR:

description
PREDICTED: transmembrane protein 205-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022665078.1 True 1740 mRNA 0.45 4 4356987 4363604

Neighbor

gene id symbol gene type direction distance location
cnn1 cnn1,cnn1b,LOC107715638,LOC107718633 coding upstream 10390 4323111 ~ 4346597 (+)
LOC103038737 plppr2a,LOC108440982,LOC108274416,LOC107550254,LOC107715659,LOC107695724,LOC107718583,LOC107661668,LOC106938566 coding upstream 197525 4080149 ~ 4159462 (+)
LOC103046751 LOC108432062 coding upstream 531347 3776523 ~ 3825640 (+)
LOC103025262 LOC108432064,LOC108256459 coding upstream 590500 3704804 ~ 3766487 (+)
LOC111191046 NA coding upstream 705652 3645713 ~ 3651335 (+)
LOC103038197 rab3d,LOC108440987 coding downstream 4114 4367718 ~ 4392866 (+)
epor NA coding downstream 38036 4401640 ~ 4414691 (+)
LOC103021497 NA coding downstream 123300 4486904 ~ 4508485 (+)
LOC111191035 LOC108412261,LOC108278278 coding downstream 147805 4511409 ~ 4598805 (+)
LOC111191037 LOC108441001,LOC108276218,LOC106606473 coding downstream 345860 4709464 ~ 4711739 (+)
G297516 NA non-coding upstream 1023 4352653 ~ 4355964 (+)
G297497 NA non-coding upstream 81164 4215295 ~ 4275823 (+)
G297405 NA non-coding upstream 190425 4127521 ~ 4166562 (+)
G297407 NA non-coding upstream 265687 4090911 ~ 4091300 (+)
G297398 NA non-coding upstream 331627 4025049 ~ 4025360 (+)
G297529 NA non-coding downstream 54372 4417976 ~ 4418769 (+)
G297530 NA non-coding downstream 67729 4431333 ~ 4435857 (+)
G297531 NA non-coding downstream 72462 4436066 ~ 4436423 (+)
LOC111191027 NA non-coding downstream 76740 4440344 ~ 4443094 (+)
LOC111191048 NA non-coding downstream 94851 4458455 ~ 4477769 (+)
LOC103041102 LOC108440983,LOC108258030,LOC107718582,LOC107661664,LOC107715658,LOC107695723,LOC107550253 other upstream 57540 4253016 ~ 4299447 (+)
LOC103030733 NA other upstream 716373 3550327 ~ 3640614 (+)
LOC111191028 grb2b,grb2,LOC108432081,LOC107719324,LOC108256494,LOC107672691,LOC107672145,LOC107723603 other upstream 1208384 3042432 ~ 3148603 (+)
G296790 tcap,LOC108413611 other upstream 2995052 1359112 ~ 1361935 (+)
LOC103044283 LOC103044283,LOC108412482 other upstream 3066567 1287516 ~ 1290420 (+)
znf653 znf653,LOC106601361,LOC107553636,LOC104961106,LOC103393609 other downstream 56393 4419997 ~ 4434071 (+)
LOC111191039 NA other downstream 287039 4650643 ~ 4675621 (+)
LOC103033323 NA other downstream 1338908 5702512 ~ 5711874 (+)

Expression


Co-expression Network