LOC111191058


Basic Information

Item Value
gene id LOC111191058
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172828.1
NCBI id APWO02000046.1
chromosome length 5964967
location 5953646 ~ 5964403 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022665101.1
GGAGGTCTCTGTTTCAGAGGGAGGCGCGTCCTCGCGCGAGAGGAACCGGCTGGACGAGCGCGCGCCGGAACTCACTCCCCGCCTCGCGCTCAGCGCTCCGGAGCTCGGCTTGCCTTCCCGTACCGGAACATTTACCGAACCGCCTCCCgggactgctgctgctgggcgCTCGCGCGCACGCGGACAATGCGCTGACAGTCTGACGCGCGTGCACGTCCCGAGCTCTCGCTGCCAGCAGCTCCCCTGAGCACGCGCGCACGAGAAACACAGAGAGCGCGAGACACCGGGAGATACCGGGAGGAGACCCGCGCGCTGCTGTCGGTTCCGCTCAGCTGCTCTTCTCCAGCATGGCCTCCGAGACCGACCCGAACCGGCGCCGGCTGCTCGCGCTGCTGGACCTGGCCGGGAACGAGCTCTGCGCGGACTGCGGCGCTCCAGGTCCGGAGTGGGCGTCGTTTACCCTCGGCGTCTTCATGTGTCAGAGCTGCTCGGGGTTCCACCGCAACATCCCTCACATCAGCCGGGTCAAATCTGTCCTCCTGGACCCCTGGGAGGCGTCAGAGGTCGAGGTGGGCAGCTGAGCTTCCTGtgataaaatactgtgataatttttatttaatatttaaactgttTTCTTAATCTAAGACCTTCACAACTACTTGTGGGAATCTCTAGGCACCTTCAAATCAATTAAATTACAATCCGCTTTGACCTGCAATGTGATTATTAAACCAGTTATTTAATCAGTGCATCTTAatgcatctttttcttctaCACACCTGTGGGATTACTACTGTATTTTCTGGACGTgcctaaaatcctttatttaaaaaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022665101.1 True 839 mRNA 0.57 2 5953646 5964403

Neighbor

gene id symbol gene type direction distance location
rnps1 LOC108411755,LOC103909923,LOC107553655 coding upstream 2152 5940247 ~ 5951494 (+)
LOC111191063 NA coding upstream 23300 5917022 ~ 5930346 (+)
LOC103034605 NA coding upstream 41257 5894766 ~ 5912389 (+)
LOC111191062 LOC108438908,LOC108276786 coding upstream 69283 5867114 ~ 5884363 (+)
LOC103034280 LOC108438908,LOC108276786 coding upstream 101875 5836505 ~ 5851771 (+)
G298007 NA non-coding upstream 62880 5865537 ~ 5890766 (+)
G298004 NA non-coding upstream 66531 5882321 ~ 5887115 (+)
G298009 NA non-coding upstream 79055 5873481 ~ 5874591 (+)
G297933 NA non-coding upstream 119506 5767522 ~ 5834140 (+)
G297936 NA non-coding upstream 125368 5827111 ~ 5828278 (+)
LOC103033323 NA other upstream 241772 5702512 ~ 5711874 (+)
LOC111191039 NA other upstream 1278025 4650643 ~ 4675621 (+)
znf653 znf653,LOC106601361,LOC107553636,LOC104961106,LOC103393609 other upstream 1519575 4419997 ~ 4434071 (+)
LOC103041102 LOC108440983,LOC108258030,LOC107718582,LOC107661664,LOC107715658,LOC107695723,LOC107550253 other upstream 1654199 4253016 ~ 4299447 (+)
LOC103030733 NA other upstream 2313032 3550327 ~ 3640614 (+)

Expression


Co-expression Network