trnas-gcu_17



Basic Information


Item Value
gene id trnas-gcu_17
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NW_019172828.1
NCBI id APWO02000046.1
chromosome length 5964967
location 2283816 ~ 2283896 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>trnas-gcu_17
GACGaggtggccgagtggttaaggcgatggacTGCTAATCCATTGTGCTCTGCACGCGTGGGTTCGAATCCACCTTCGTCg

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
trnas-gcu_17 True 81 tRNA 0.58 1 2283816 2283896

Neighbor


gene id symbol gene type direction distance location
trnas-gcu_16 NA coding downstream 138 2283597 ~ 2283678 (-)
trnas-gcu_15 NA coding downstream 357 2283379 ~ 2283459 (-)
trnas-gcu_14 NA coding downstream 575 2283160 ~ 2283241 (-)
trnas-gcu_13 NA coding downstream 794 2282942 ~ 2283022 (-)
trnas-gcu_12 NA coding downstream 1012 2282724 ~ 2282804 (-)
trnas-gcu_18 NA coding upstream 308 2284204 ~ 2284285 (-)
trnas-gcu_19 NA coding upstream 527 2284423 ~ 2284504 (-)
trnas-gcu_20 NA coding upstream 746 2284642 ~ 2284723 (-)
trnas-gcu_21 NA coding upstream 965 2284861 ~ 2284941 (-)
trnas-gcu_22 NA coding upstream 1183 2285079 ~ 2285159 (-)
G296987 NA non-coding downstream 55612 2227646 ~ 2228204 (-)
G296980 NA non-coding downstream 73937 2209670 ~ 2209879 (-)
G296978 NA non-coding downstream 83426 2200179 ~ 2200390 (-)
G296974 NA non-coding downstream 131669 2151918 ~ 2152147 (-)
G296972 NA non-coding downstream 144896 2138713 ~ 2138920 (-)
G296998 NA non-coding upstream 198661 2482557 ~ 2482860 (-)
G297007 NA non-coding upstream 211221 2495117 ~ 2495708 (-)
G297009 NA non-coding upstream 221940 2505836 ~ 2506158 (-)
G297032 NA non-coding upstream 365516 2649412 ~ 2659222 (-)
G297034 NA non-coding upstream 381902 2665798 ~ 2682493 (-)
LOC111191047 NA other downstream 425994 1845913 ~ 1857822 (-)
LOC107197178 syngr1a,LOC108413620,LOC107582870,LOC107694963,LOC107727456,LOC107684634,LOC107725053,LOC107590782 other downstream 895107 1371515 ~ 1388709 (-)
LOC103037146 NA other upstream 213319 2497215 ~ 2531502 (-)
G297195 kpna2,LOC108432045,LOC108261381 other upstream 940311 3224207 ~ 3227171 (-)
G297334 farsa,LOC106601350 other upstream 1312591 3596487 ~ 3610695 (-)
elof1 elof1,LOC101167459 other upstream 2068719 4352615 ~ 4355768 (-)
G297720 NA other upstream 2081681 4365577 ~ 4366130 (-)

Expression



Co-expression Network