G83318


Basic Information

Item Value
gene id G83318
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 7521782 ~ 7526798 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU94768
AATTGATCATAATGAATTAATTTGTGTCAAGATTAAACATTAGTCACAGAAATAAAGTGGTATTTAGTCCCAACAGTTATATTTTCAGTCTGAGAAACAGAGGAATCCCAAAAAACTGGAGTTGCTTTATTTTATGAAATATGAGGAGCTAAATATGGATATCAGACAGTCCGTTAAGAGATGAGATGTGCTGACAGATAAAATAAATACATGATTGTGAGAGCCTGCGTATATGATTTGTCTGATTTCTTCAAGCCGTCGTATTTACCATGTTTACTATGGTAATAGCGCGCATAGTCTTGGTGATCAGAATCCACATCGGATCACAAACAGAAGTTATTTCAAACACTTGCTGCTGTCTGAAAGTGAGTTTTGAGCTAAAATGTTTTTAAAAGTCTTTAATGCTGATGTTAGCTGGTAACCTACATGTAATCATCCATGGTGCCTCCGTCTCCACACACAGATAAACTCCGCCTTTGTTCATAACCACTCCCTCAAGCCCACTTTGGACCAAGGTATTCGCCGGCCCGAAAAACCCTGGCCGTCGGCCCCAAGGAAGCCCCGACAAGGCACGATCAAGCCCCGGAAGTGACAGTGGAAACGTGACTGGCCCTGGCATGCACTAGCACGCCCGCTTTAGGCCCGACAGTGGAAACGCGGCTATTGTATCATGTTATTTATGTATACTCTCTGATTTTAGGGGCTTTCGCACTGAATAGTTCTAGGAACTCAGTTATAGGAACTACCCACTAGGATAACTAATTTCTGTTACTGATTGCATTCGCACTGGGAATAATAACTCTGAAGCGGCTGACAGCGGAGTCTTTAAGTGCGGCATTTACAAACGCTAAAAACTGGTGGATGGAAGATGCTGTGATCGGAGCTGCGTTTGTTGTGTGCCGTGGGTTTCGTGATAACGGAGATGGAATCTGTACGCCTAATTTACATGACTGAAAGAGCAAAAAGTGGGGCTAAGAGACGAAATTTCCTATGACAACTTTCAGTATTACATATTATCGAGGCAGAGAAAAGAACACAACCCTGCAAACAACAGTCAGGAATTGACTACAAGGATCATCGCTGCAGGTGACGTTAAAGGGTCAGGAGATTTTCTCGACTAACTTCACTGATGTTGGCTCAATTTCCATGTCGCCACCTGACTGTCACATATCCAACGCATCTGCAGCCACATTCTTCACAAAGCATCCTCATTTTATTTGCATCAGCACCCAGCCGTCATCACATTTAGACAACCGTTACCGAGCGCCACGCACAGGGTGTTAGCTGGGGATTTCCAGGGGAGCAAATTTGTGATGTGTTCCTAGATGTGCAGTGTTCAGGCTGACTGGCGTTGTGACTCCCCTCTGAGCTCAGAGGGATACAGAGCCAAAGGCAATGTGCCATGATCCAGCAAGCTGCTCTGCCAGTCGGCTACTAATGTCTGTCTCACTTGGCCCAGACTGTAATGCAAATATTTTGCCGAGATGAACATGGAAATCATGTGTGAATGTGAATTATTTGGTTGTTAGATATCATCAGGATGAGAACTAATGTAATATCTATTATCCTAAATGTAAAATAATAACTTAAAACCATTAAAAAATATTTTATCATTCCCATAAAAGACAATAAAAAATGCTAAATGAGATTTTGAAATATGCAAATGTGAATTATCTGGTTGTTAGATACCATCAGGATGAGAACTAATGTAATATCTGGCACTCATCACACACACACACACACACACACACACAAAATACTCTTTTTGGCTTTTACATTTCTGTAATCCAATACCTTACCACTATTAAAAATATATTAACATTCCCATAAAAGACAATATGAAATGCTAAATGAGATCTTGAAATGTCTTTACAATGCATTTACATGTAAAATGCAAGAAAATGAAGGACCGAAGTGTTAATATAGACTTAATGAGTTGATTTAAATGATTTTATACCATCATATGTGCTTTACTAAAAACATTATGCACAAAAAACAAAACAAAAAAAAAAACACTGAATGACAAAATTCAAAATGGCTGCATAAAGTGAGAGAAAAGAGGGGGGAAATGGCAGATTTATTCAAGGTGTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU94768 True 2092 lncRNA 0.40 2 7521782 7526798

Neighbor

gene id symbol gene type direction distance location
CI01000013_07455026_07456463 NA coding downstream 65276 7454241 ~ 7456506 (-)
CI01000013_07339918_07367774 NA coding downstream 154008 7339709 ~ 7367774 (-)
CI01000013_07293239_07332640 PQLC1 coding downstream 189122 7292985 ~ 7332660 (-)
CI01000013_07235040_07261096 KCNG4, KCNG4A coding downstream 260432 7234548 ~ 7261350 (-)
CI01000013_07210430_07219124 NA coding downstream 302658 7210236 ~ 7219124 (-)
CI01000013_07641497_07662151 NA coding upstream 114119 7640917 ~ 7663747 (-)
CI01000013_07703864_07718313 NA coding upstream 176963 7703761 ~ 7719073 (-)
CI01000013_07804879_07805627 NA coding upstream 278068 7804866 ~ 7805665 (-)
CI01000013_07989784_08013498 NA coding upstream 462913 7989711 ~ 8013936 (-)
CI01000013_08016159_08020344 PLCG2 coding upstream 489317 8016115 ~ 8020344 (-)
G83301 NA non-coding downstream 2235 7471754 ~ 7519547 (-)
G83280 NA non-coding downstream 78483 7442899 ~ 7443299 (-)
G83285 NA non-coding downstream 83025 7438226 ~ 7438757 (-)
G83269 NA non-coding downstream 100131 7421296 ~ 7421651 (-)
G83253 NA non-coding downstream 127708 7393851 ~ 7394074 (-)
G83212 NA non-coding upstream 246833 7773631 ~ 7798954 (-)
G83393 NA non-coding upstream 292356 7819154 ~ 7819365 (-)
G83395 NA non-coding upstream 294902 7821700 ~ 7822011 (-)
G83211 NA non-coding upstream 341972 7868770 ~ 7900168 (-)
G83475 NA non-coding upstream 430164 7956962 ~ 7958056 (-)
CI01000013_05883498_05884071 CHTF8 other downstream 1637410 5882049 ~ 5884071 (-)
G81547 NA other downstream 1777744 5739526 ~ 5744038 (-)
G81032 NA other downstream 2771221 4748809 ~ 4750561 (-)
CI01000013_04561253_04567647 MAP2K1 other downstream 2962879 4560340 ~ 4567647 (-)
CI01000013_09309438_09335834 MICAL3A other upstream 1780238 9307036 ~ 9336077 (-)
G85170 NA other upstream 2953063 10479861 ~ 10480700 (-)
CI01000013_10564288_10569141 NA other upstream 3036661 10563459 ~ 10569290 (-)
G85188 NA other upstream 3065406 10592204 ~ 10595337 (-)
G85401 NA other upstream 3508234 11035032 ~ 11035466 (-)

Expression


Co-expression Network