G83471


Basic Information

Item Value
gene id G83471
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 7982184 ~ 7984602 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU94933
TCTGCCTGTCGCACAGCTGCTCATACATGCGCAGGCCGACCTGGGTGCTCTCCAGGGTGGAGATGATTTGTAGCTGAGTGTCCTTGTTCTCTATGATGTTATACTCCAGCATCAAACACAGGATCTGCACAGCAGAAACACAGGGATGAACGTTTTGTCCTATATGCAGGTTTCTATGGAGTTTCTTGAACTCTTCACGCATAATTTAGTGAGCTGCCTTGCTGTCTACTTAGGCAGTATCCACACAGAAATGGAAACTCACGGGTAACTGATTTTATCCTTTTCAGGGGCAACAACCCTTAACACCACTTGACTAAAGGCCCCGATATACTCATGGCAAAATTATTTTTTGTTCTTCGTTTGGGGGTAAAACTAAGTTTAAAATGTGACCAGCGATATACTGTTATCGAACATCTGACATATGCCTCATTTCATCAGAAGCACAACTTCATTTTCTACTATAAAGCGGTTATCCAGTGTGTTCATGTTTTCACCTGTGGAGGTCGTACCTCAACGGACTCAAACAGACTAAATGAGTCCCGCGTGAAAGAAGGCGGAGCCTTATCGTCACGGACCAATGGTAGTACGAAGGTGTTTTGCAGCTGGAGAACTTTTCCTGAGAGTTCGCTTTGGCAAGCCGTTTCAAACTCACAAAACAAACTTCGTTTTGGCCTGATTTTGTTCGAAATGATGTCACATCAGTTTGTTTGAAGTATATCGGGGCCTTGAAGGTTCTTTCATATTAGCAAAACTTCAGAGAAATTTTGCAGGCAAAAAAAGTCATTTGTCTATTGTCAGTATTGTAGCAATGTATGAATCACCGCTCACACAGAAGTCACAACAACGAATTTGTGCAAACTACAAAAATCTACAAATCTATCGCAAAAAATCTCACACGAAATTTGACATGTGAATACCCAAATGCTAAACTAACAAGTGGATAGTCTAATAAACACAAAAACATAGCGCATACAAATATCAGATGAAATAGTAAAATATTTGCTGTTTATTCTGGTCTAGAACCGCCAACTTAAGAGTTTAAGTGATCAACTACCATTTATTTTGTTTTTTCAAGTTGTTTAGGGGCAAGTTTAACTAAAATTTATCATACTATGACAATAGATGGCTGTGGGGAAAAAAAAAACATCTTGTTTACTAAGTCTAGTTGTTATTTCTTCCTCAGAAGCATTCATTAGTACCTTGTAAACACAACTTTGTTTCTCAGGAAGTTGCATAATGCTTGCCCATCAGATAAAAACTGCTAATTTTCAGTCTGCTCTAGCCATTTGTGTGTGAAATATTCATCAGGTGGTCAGTAAAAAGACTGTGGGCGATCTTTGGTCATGCCCTTTAAAGCTGAGACTAGCAAATCCATGGTTGTGTCTGAAATCACCCACATACCCTTAAATAGAGCACTATTTGAAGGGACAGCCTGAGTGGTGTCCGAAACCATAGTGGAGGTTATCGAGTGCACTCTTTTAACAAGTGTACAACTGATGTACACTCAACAGCTAGAGAATGCCCACAATGCGCTGTGAGGGTCATGCTGAATGAATTCCCGCATCTCGTCAGAAGATGGCGCCTGCAGTTGAATCATCCATCCATCCATTTTCCAAACCGCTGGTCCAATGTGGGTACAGCGTAATCATACAGGTATACATTTTTAATTGATTATTAAATTGTTTAATTAAGATTTATACATGCTAGTTTCATGACAGAGTTCAAGATAAATCTTTTCATTACTGCTGGAGCTGCCAAGTTTAAAATAATTATTAAACAGCAAGCACAAACTATGCAAAAGTGGCAGCCCTTCAAGCACACTCTAAGTGTTTGAATTCACTCACTCGTTTTCATTCACTCCTTCAAGTGGACTATATTAGCGGAGTAATGTAGGAAATAGTGAATGAGGGTATCGGGGGCGATTTCAAACATAGCTTAGGTCTCAGAAGCTAGCAGTCTACCGTTTTGAAAAGCCTTTGGGCTGAACCGTCAATTATGCCAAATGCTACTTAGGTGGTTAGCTTGCTACATTTCATCTCAAAGCAACAGTCAGTCATTTGTACCTCCACCATGGTCTGGTTCCCCCGCAGGGCCAGGAGCATGCAGGGTCCCAGTTTATTTTCAGCCAGCGACAGTAGAAATTTCTTCGTCTTATAGCAGGAGCCCATGAGGATGTGGACCTGAGAGGACAAACGACATCAGACCATAAAAGCAGATATAGTGGCAGGACAAAAGACTAAACTAAATGAGACATTTCGTATTTCATACAAACAGTTTCATACCATGCTAGCAAACAACTCCCCGTCATCGTCGCAAGCTACGCCTCCTGGACTGTACAGCTGGAACCACCCGTCTTTTCCAGA

Function

NR:

description
PREDICTED: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU94933 True 2363 lncRNA 0.41 2 7982184 7984602

Neighbor

gene id symbol gene type direction distance location
CI01000013_07804879_07805627 NA coding downstream 176519 7804866 ~ 7805665 (-)
CI01000013_07703864_07718313 NA coding downstream 263111 7703761 ~ 7719073 (-)
CI01000013_07641497_07662151 NA coding downstream 318437 7640917 ~ 7663747 (-)
CI01000013_07463570_07636742 CDH13 coding downstream 345442 7463570 ~ 7636742 (-)
CI01000013_07455026_07456463 NA coding downstream 525678 7454241 ~ 7456506 (-)
CI01000013_07989784_08013498 NA coding upstream 5109 7989711 ~ 8013936 (-)
CI01000013_08016159_08020344 PLCG2 coding upstream 31513 8016115 ~ 8020344 (-)
CI01000013_08042921_08047883 TLDC1 coding upstream 57608 8042210 ~ 8048460 (-)
CI01000013_08059677_08060143 COTL1 coding upstream 74366 8058968 ~ 8060143 (-)
CI01000013_08072726_08076570 NA coding upstream 87977 8072579 ~ 8077191 (-)
G83477 NA non-coding downstream 7755 7972740 ~ 7974429 (-)
G83475 NA non-coding downstream 24128 7956962 ~ 7958056 (-)
G83211 NA non-coding downstream 82016 7868770 ~ 7900168 (-)
G83395 NA non-coding downstream 160173 7821700 ~ 7822011 (-)
G83393 NA non-coding downstream 162819 7819154 ~ 7819365 (-)
G83465 NA non-coding upstream 94212 8078814 ~ 8079209 (-)
G83620 NA non-coding upstream 466237 8450839 ~ 8451904 (-)
G83658 NA non-coding upstream 499966 8484568 ~ 8484769 (-)
G83662 NA non-coding upstream 511441 8496043 ~ 8496249 (-)
G83663 NA non-coding upstream 511833 8496435 ~ 8496691 (-)
CI01000013_07339918_07367774 NA other downstream 599824 7339709 ~ 7367774 (-)
CI01000013_05883498_05884071 CHTF8 other downstream 2097812 5882049 ~ 5884071 (-)
G81547 NA other downstream 2238146 5739526 ~ 5744038 (-)
G81032 NA other downstream 3231623 4748809 ~ 4750561 (-)
CI01000013_04561253_04567647 MAP2K1 other downstream 3423281 4560340 ~ 4567647 (-)
CI01000013_09309438_09335834 MICAL3A other upstream 1322434 9307036 ~ 9336077 (-)
G85170 NA other upstream 2495259 10479861 ~ 10480700 (-)
CI01000013_10564288_10569141 NA other upstream 2578857 10563459 ~ 10569290 (-)
G85188 NA other upstream 2607602 10592204 ~ 10595337 (-)
G85401 NA other upstream 3050430 11035032 ~ 11035466 (-)

Expression


Co-expression Network