G303221


Basic Information

Item Value
gene id G303221
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172836.1
NCBI id APWO02000054.1
chromosome length 895725
location 59902 ~ 61313 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU417562
gtgcctttatttaaaaaagaaaagaaaaagaaagaaataaaatcacatacctgtaaagataaaataaacaaacaaaaaaaaaaccctaaaacaatCAGCAAAAGAACATGCACAGTGAGAATCCTTTTGCATAATAGTGAAGGGATTTCTGGACAGACTgcaattcatgtttaaaaacaaaaaaataacaataaatcagTGCCACTTTCACAGAGACGACGTGAAACTAAAAGACGAAAGCAAGTGAATGAGATGAGCTTGAATAATCAATGTAACACTCCAGAAAGTTTCAGACAATCTCTAAAGAAAGCTTTAAACTCTAAGTAAACAGATAGGACGTCAGGAAAGGCAGAACACAATAGGATGTTGGTACATCCTCGGTGGATCCCAAACAATGAAAAAGGGGCAAACAATGTATTGTGCAATTGTGTATAGCTCTAGTATTAACTAAGAACTGACTAATAATAAACCTACAGTACACCAGGCTTGTGTGGCTCAGGATAGCATTTGTTTACTTTTGTTGGGAAGAAACTACATATTCTATCTAGGCTGAATAACATGAAGATGGGGTCATTCTGTAGTCCAtaagaaaaaaatctcaaaCAACATTCACAGCCTTGTATCTTCTGTGTGTATAGTTAATGAAGAGATTTATTGAATAGAGCAAGATCATTAGCGCTCTCGTATTCTGTATAAAAAGCTTTATGACAGACTGCAAAGGCCCTGCTGAAAAGTTGTGTCCATGGGATCTACGCTGACTCCACATCAGGGTAGATGCTCATCAGGGTCATTGGCAGGACCAGGAAGGCTTAAAGTTGCTGCACTGCATTAGGATGTAGACGGAATCTGTGTGGGATTAAGGTGGGCTGTAGTGATGGGGCTCATTGGTGAAGCTCAACTGCTAAAGTCCATGTGAGCTCCACATGAGCACGATCCCACAGTTTATAAACCCATTATTTATACCTGCAACATATGAATGGTGGCATGGTGTCTCTAGAATCCACTgataaagaattaaaaatttaatataaCGTAACAAAAGCACAAATGCACAGACCAATGTAAGAACGTAATTTAAAAGACCAATCGATCAATCAATCAGAAATAACTGGAACATCGTTGTTGGCATTAGTACAGACTTAATAACAAGCTCTCAGCAAATGCAGACATAACATTTCAATGAGATATTCAGTTATAACTGTAACACATCGACTTTGTTTCAGTGCTAAAACTGGTCTGTCTGGTGCATCAAATACTGGCAAGGACATGAAGAGAGTAATAGAGGGCCTAATAAAGCACTCACTCAGTGCACTGCTGTTTAAAAcccaaaaagaaacagaaacaaaccT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU417562 True 1349 lncRNA 0.37 2 59902 61313

Neighbor

gene id symbol gene type direction distance location
LOC103030803 aph1a,LOC108427283,LOC100304952,LOC105021718,LOC107670051 coding upstream 35254 7635 ~ 24648 (+)
reep5 reep5,LOC107740782,LOC107715872,LOC108246451 coding downstream 9963 71276 ~ 81191 (+)
pam pam,LOC107577007,LOC107737006 coding downstream 126329 187642 ~ 309508 (+)
ppip5k2 ppip5k2 coding downstream 254669 315982 ~ 359784 (+)
cunh5orf30 cunh5orf30,zgc:194281,c16h5orf30,LOC107564120,LOC107740794,LOC107670048,LOC107665462,LOC107715868 coding downstream 305634 366947 ~ 372699 (+)
LOC103024265 NA coding downstream 320742 382055 ~ 383879 (+)
G303218 NA non-coding upstream 8862 30569 ~ 51040 (+)
G303226 chd1 non-coding downstream 24584 85897 ~ 87878 (+)
G303228 chd1 non-coding downstream 28927 90240 ~ 92620 (+)
G303305 NA non-coding downstream 300632 361945 ~ 363425 (+)
G303340 NA non-coding downstream 379109 440422 ~ 446559 (+)
G303341 NA non-coding downstream 382546 443859 ~ 445869 (+)
G303307 cunh5orf30,zgc:194281,c16h5orf30,LOC107564120,LOC107740794,LOC107670048,LOC107665462,LOC107715868 other downstream 304680 365993 ~ 383873 (+)
LOC111191247 NA other downstream 744777 806090 ~ 806546 (+)

Expression


Co-expression Network