G303341


Basic Information

Item Value
gene id G303341
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172836.1
NCBI id APWO02000054.1
chromosome length 895725
location 443859 ~ 445869 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU417753
tggaaaacgttagcaactgcctagcaacaccttagcaaccacatagcaaccacctagcaacaccttagcaaccaccccagataccatagcaacaccttagcaaccaccctggataccatagcaacaccttagcaaccgcatagcaacaccttagcaaccacctagcaacaccttagcaaccaccccggataccatagcaacaccttagcaaccgcatagcaacaccttagcaaccacctagcaaccaactagcaacaccctagcaaccacctagcaacaccttagcaaccaccccagataccatagcaacaccttagcaaccacctagcaacaccttagcaaccaccccagataccatagcaacaccttagcaaccgcatagcaacaccttagcaaccaccttagcaaccaccttagcaaccacctagcaacaccttagcaaccgcatagcaacaccttagcaaccacctagcaacaccttagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU417753 True 484 lncRNA 0.50 5 443859 445869

Neighbor

gene id symbol gene type direction distance location
LOC103031748 NA coding upstream 39108 402467 ~ 404751 (+)
LOC103025635 LOC103025635 coding upstream 45013 395959 ~ 398846 (+)
LOC103024567 LOC108427294,LOC108413448 coding upstream 54589 385503 ~ 389270 (+)
LOC103024265 NA coding upstream 59980 382055 ~ 383879 (+)
cunh5orf30 cunh5orf30,zgc:194281,c16h5orf30,LOC107564120,LOC107740794,LOC107670048,LOC107665462,LOC107715868 coding upstream 71160 366947 ~ 372699 (+)
trnar-ccu_63 NA coding downstream 447596 893465 ~ 893537 (+)
trnam-cau_91 NA coding downstream 447891 893760 ~ 893831 (+)
trnam-cau_92 NA coding downstream 448093 893962 ~ 894033 (+)
trnam-cau_93 NA coding downstream 448308 894177 ~ 894248 (+)
G303305 NA non-coding upstream 80434 361945 ~ 363425 (+)
G303228 chd1 non-coding upstream 351239 90240 ~ 92620 (+)
G303226 chd1 non-coding upstream 355981 85897 ~ 87878 (+)
G303221 NA non-coding upstream 382546 59902 ~ 61313 (+)
G303218 NA non-coding upstream 392819 30569 ~ 51040 (+)
LOC111191252 NA non-coding downstream 105501 551370 ~ 567446 (+)
G303418 NA non-coding downstream 346483 792352 ~ 795312 (+)
G303413 NA non-coding downstream 359844 805713 ~ 809762 (+)
G303421 NA non-coding downstream 367010 812879 ~ 813722 (+)
G303307 cunh5orf30,zgc:194281,c16h5orf30,LOC107564120,LOC107740794,LOC107670048,LOC107665462,LOC107715868 other upstream 59986 365993 ~ 383873 (+)
LOC111191247 NA other downstream 360221 806090 ~ 806546 (+)

Expression


Co-expression Network