Gene
RNA
| Item | Value |
|---|---|
| gene id | G303418 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NW_019172836.1 |
| NCBI id | APWO02000054.1 |
| chromosome length | 895725 |
| location | 792352 ~ 795312 (+) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU417857 | True | 257 | lncRNA | 0.48 | 3 | 792352 | 795312 |
| TU417859 | False | 211 | lncRNA | 0.48 | 3 | 792352 | 794940 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| syk | syk | coding | upstream | 244181 | 432587 ~ 548171 (+) |
| LOC103031748 | NA | coding | upstream | 387601 | 402467 ~ 404751 (+) |
| LOC103025635 | LOC103025635 | coding | upstream | 393506 | 395959 ~ 398846 (+) |
| LOC103024567 | LOC108427294,LOC108413448 | coding | upstream | 403082 | 385503 ~ 389270 (+) |
| LOC103024265 | NA | coding | upstream | 408473 | 382055 ~ 383879 (+) |
| trnar-ccu_63 | NA | coding | downstream | 98153 | 893465 ~ 893537 (+) |
| trnam-cau_91 | NA | coding | downstream | 98448 | 893760 ~ 893831 (+) |
| trnam-cau_92 | NA | coding | downstream | 98650 | 893962 ~ 894033 (+) |
| trnam-cau_93 | NA | coding | downstream | 98865 | 894177 ~ 894248 (+) |
| LOC111191252 | NA | non-coding | upstream | 224906 | 551370 ~ 567446 (+) |
| G303340 | NA | non-coding | upstream | 345793 | 440422 ~ 446559 (+) |
| G303341 | NA | non-coding | upstream | 346483 | 443859 ~ 445869 (+) |
| G303305 | NA | non-coding | upstream | 428927 | 361945 ~ 363425 (+) |
| G303228 | chd1 | non-coding | upstream | 699732 | 90240 ~ 92620 (+) |
| G303413 | NA | non-coding | downstream | 10401 | 805713 ~ 809762 (+) |
| G303421 | NA | non-coding | downstream | 17567 | 812879 ~ 813722 (+) |
| G303307 | cunh5orf30,zgc:194281,c16h5orf30,LOC107564120,LOC107740794,LOC107670048,LOC107665462,LOC107715868 | other | upstream | 408479 | 365993 ~ 383873 (+) |
| LOC111191247 | NA | other | downstream | 10778 | 806090 ~ 806546 (+) |
