G303421


Basic Information

Item Value
gene id G303421
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172836.1
NCBI id APWO02000054.1
chromosome length 895725
location 812879 ~ 813722 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU417862
GGGTTCTGCCTGTGAACCTCAAGCCATAGAACATCCTGGTTCAGATGTACAGTTTGGAACCACGCCTTCATCTTCTGTTCTTCTGGACCTTTCTCATGAGTGGTTTACCCATGAGGCCAAAtcctgctgtgtgtgagaggtgacCCTTCAACACCAGCATGGAGCTCACCTCAAAGAAGTCTCAGATCATCTCTCCACCATCTGCTCTACGACCCCTGGCTAAGTATACACCACGACACAGCCACCACACCAGGCACACCAGTCAGGTACCATA
>TU417863
GGGTTCTGCCTGTGAACCTCAAGCCATAGAACATCCTGGTTCAGATGTACAGTTTGGAACCACGCCTTCATCTTCTGTTCTTCTGGACCTTTCTCATGAGTGGTTTACCCATGAGGCCAAAtcctgctgtgtgtgagaggtgacCCTTCAACACCAGCATGGAGCTCACCTCAAAGAAGTCTCAGATCATCTCTCCACCATCTGCTCTACGACCCCTGGCTAAGTATACACCACGACACAGCCACCACACCAGGCACACCAGTCAGGTACCATATAagacaatagtaataataataataaaaaaagcaatatttttAATCTCTAGTTTAGAGTGTTCTctagtagagctgggcgatttatcgattaattcgaatttacagttaaggacaaggtgtttttatgaaaatcgattttctctgagttttcattttcaccaccgacgctCCTCTGTGGGCACAGAGTGAGTTTAGCTAGCTCCCTCCCTCCCGTGCGCGTGCGTAACCCCCgcacctccctccctcacttccTCCCTCccgtacacatacacacacacaaaatctaGCGACTCCGTGATCTGGAGTTGGTTCGGTTTTGCGGTGAAGAAGTGCTGCTATCATAGGAATgaacgcagcagcagcactagttcACCGTTCAACGTTAAACAAGGAACTGTCCCTGGCACATCTTCCAACCGTGTACCAGGTTCTGTATGCACTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU417862 False 274 lncRNA 0.51 2 812879 813279
TU417863 True 717 lncRNA 0.47 2 812879 813722

Neighbor

gene id symbol gene type direction distance location
syk syk coding upstream 264708 432587 ~ 548171 (+)
LOC103031748 NA coding upstream 408128 402467 ~ 404751 (+)
LOC103025635 LOC103025635 coding upstream 414033 395959 ~ 398846 (+)
LOC103024567 LOC108427294,LOC108413448 coding upstream 423609 385503 ~ 389270 (+)
LOC103024265 NA coding upstream 429000 382055 ~ 383879 (+)
trnar-ccu_63 NA coding downstream 79743 893465 ~ 893537 (+)
trnam-cau_91 NA coding downstream 80038 893760 ~ 893831 (+)
trnam-cau_92 NA coding downstream 80240 893962 ~ 894033 (+)
trnam-cau_93 NA coding downstream 80455 894177 ~ 894248 (+)
G303413 NA non-coding upstream 3117 805713 ~ 809762 (+)
G303418 NA non-coding upstream 17567 792352 ~ 795312 (+)
LOC111191252 NA non-coding upstream 245433 551370 ~ 567446 (+)
G303340 NA non-coding upstream 366320 440422 ~ 446559 (+)
G303341 NA non-coding upstream 367010 443859 ~ 445869 (+)
LOC111191247 NA other upstream 6333 806090 ~ 806546 (+)
G303307 cunh5orf30,zgc:194281,c16h5orf30,LOC107564120,LOC107740794,LOC107670048,LOC107665462,LOC107715868 other upstream 429006 365993 ~ 383873 (+)

Expression


Co-expression Network