Gene
RNA
| Item | Value |
|---|---|
| gene id | G83641 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000013 |
| NCBI id | null |
| chromosome length | 12551977 |
| location | 8717223 ~ 8819314 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU95122 | True | 9025 | lncRNA | 0.38 | 4 | 8717223 | 8819314 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000013_08616374_08648611 | BICD1A, BICD1 | coding | downstream | 68612 | 8616204 ~ 8648611 (-) |
| CI01000013_08555865_08573521 | FGD4, FGD4A | coding | downstream | 143702 | 8555208 ~ 8573521 (-) |
| CI01000013_08418098_08441411 | NA | coding | downstream | 275472 | 8417837 ~ 8441751 (-) |
| CI01000013_08311120_08328130 | NA | coding | downstream | 388880 | 8310985 ~ 8328343 (-) |
| CI01000013_08308180_08308362 | NA | coding | downstream | 407310 | 8307851 ~ 8309913 (-) |
| CI01000013_08950324_08962808 | NA | coding | upstream | 130664 | 8949978 ~ 8962808 (-) |
| CI01000013_09007324_09008538 | NA | coding | upstream | 187943 | 9007257 ~ 9008749 (-) |
| CI01000013_09293519_09305846 | TTC38 | coding | upstream | 473819 | 9293133 ~ 9305846 (-) |
| CI01000013_09309438_09335834 | MICAL3A | coding | upstream | 490058 | 9307036 ~ 9336077 (-) |
| CI01000013_09336832_09367107 | MICAL3A, MICAL3 | coding | upstream | 517258 | 9336572 ~ 9367304 (-) |
| G83725 | NA | non-coding | downstream | 2759 | 8714181 ~ 8714464 (-) |
| G83724 | NA | non-coding | downstream | 3754 | 8713204 ~ 8713469 (-) |
| G83707 | NA | non-coding | downstream | 29152 | 8687827 ~ 8688071 (-) |
| G83706 | NA | non-coding | downstream | 32128 | 8684886 ~ 8685095 (-) |
| G83702 | NA | non-coding | downstream | 39118 | 8677891 ~ 8678105 (-) |
| G83767 | NA | non-coding | upstream | 71982 | 8891296 ~ 8891501 (-) |
| G83768 | NA | non-coding | upstream | 74675 | 8893989 ~ 8894294 (-) |
| G83776 | NA | non-coding | upstream | 85999 | 8905313 ~ 8905562 (-) |
| G83762 | NA | non-coding | upstream | 387648 | 9206962 ~ 9207761 (-) |
| G83765 | NA | non-coding | upstream | 389504 | 9208818 ~ 9209453 (-) |
| CI01000013_07339918_07367774 | NA | other | downstream | 1334863 | 7339709 ~ 7367774 (-) |
| CI01000013_05883498_05884071 | CHTF8 | other | downstream | 2832851 | 5882049 ~ 5884071 (-) |
| G81547 | NA | other | downstream | 2973185 | 5739526 ~ 5744038 (-) |
| G81032 | NA | other | downstream | 3966662 | 4748809 ~ 4750561 (-) |
| CI01000013_04561253_04567647 | MAP2K1 | other | downstream | 4158320 | 4560340 ~ 4567647 (-) |
| G85170 | NA | other | upstream | 1660547 | 10479861 ~ 10480700 (-) |
| CI01000013_10564288_10569141 | NA | other | upstream | 1744145 | 10563459 ~ 10569290 (-) |
| G85188 | NA | other | upstream | 1772890 | 10592204 ~ 10595337 (-) |
| G85401 | NA | other | upstream | 2215718 | 11035032 ~ 11035466 (-) |
