LOC103024265


Basic Information

Item Value
gene id LOC103024265
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172836.1
NCBI id APWO02000054.1
chromosome length 895725
location 382055 ~ 383879 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022665573.1
AGTTCCTCAAGCGGTATGTATACGGAACACTACGGCATCTTCCAGATCAACAACCGCCGGTGGTGTAGCGATGGCAAATTCCCCGGCAAAAAAGACTGTCCATTCACCTGCAACCAGCTGTTCTCCCTCCAGAATAGCATCGATTGTGCCAAGATCATAGTGCAGAAGCTGGGCATGACACCCTGGAAAGGCTGGCGGTACGAATGTTGGGGCCAAGATGTGAGCAAGTACGTCGCAGGCTGTGGCGTGTAAATGAAGACCCCGGAGTGATGCACCCAAACGAGATGCCTCTTCAATTCCACACTGTTTCAATTCTTTAGCCAGTCTTTTAACAGAGTATTTACCCAGAAACTAGGATAAGGATAAACTAGGATCGTTCCATTGTTTTCATAAAGAATGAACCATTTAAACCTAACAAACATGTACTCCAACattttgatttctgattttgctaaacATACTTGTTTCCCAAAACTGCCATTGCCAAactgtattataaaaaataaattgtataataaaaaca

Function

GO:

id name namespace
GO:0003824 catalytic activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022665573.1 True 523 mRNA 0.43 3 382055 383879

Neighbor

gene id symbol gene type direction distance location
cunh5orf30 cunh5orf30,zgc:194281,c16h5orf30,LOC107564120,LOC107740794,LOC107670048,LOC107665462,LOC107715868 coding upstream 9356 366947 ~ 372699 (+)
ppip5k2 ppip5k2 coding upstream 22271 315982 ~ 359784 (+)
pam pam,LOC107577007,LOC107737006 coding upstream 72547 187642 ~ 309508 (+)
reep5 reep5,LOC107740782,LOC107715872,LOC108246451 coding upstream 300864 71276 ~ 81191 (+)
LOC103030803 aph1a,LOC108427283,LOC100304952,LOC105021718,LOC107670051 coding upstream 357407 7635 ~ 24648 (+)
LOC103024567 LOC108427294,LOC108413448 coding downstream 1624 385503 ~ 389270 (+)
LOC103025635 LOC103025635 coding downstream 12080 395959 ~ 398846 (+)
LOC103031748 NA coding downstream 18588 402467 ~ 404751 (+)
syk syk coding downstream 48708 432587 ~ 548171 (+)
trnar-ccu_63 NA coding downstream 509586 893465 ~ 893537 (+)
G303305 NA non-coding upstream 18630 361945 ~ 363425 (+)
G303228 chd1 non-coding upstream 289435 90240 ~ 92620 (+)
G303226 chd1 non-coding upstream 294177 85897 ~ 87878 (+)
G303221 NA non-coding upstream 320742 59902 ~ 61313 (+)
G303218 NA non-coding upstream 331015 30569 ~ 51040 (+)
G303340 NA non-coding downstream 56543 440422 ~ 446559 (+)
G303341 NA non-coding downstream 59980 443859 ~ 445869 (+)
LOC111191252 NA non-coding downstream 167491 551370 ~ 567446 (+)
G303418 NA non-coding downstream 408473 792352 ~ 795312 (+)
G303413 NA non-coding downstream 421834 805713 ~ 809762 (+)
LOC111191247 NA other downstream 422211 806090 ~ 806546 (+)

Expression


Co-expression Network