G83884


Basic Information

Item Value
gene id G83884
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 9224271 ~ 9225573 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU95418
GAGAAACAGGAAGTCCTTGAGTGAATCTCGCTATGCTAGCATCCTATTCTCTCTATCTCATGCTCTCTATTTCAGGCTGAGCTCTATATTAATTCCCACATGGCATAGCTTGGATAAGCAAAACGTGTGTATGCATGCATGCGTTTGAAGATATTTGCCTCCGCATACAGTTTTCCCATTAGGCCTGGCCTGAGAGTCATGCACTCTTCTCTCATCGCCAGCAGACACACATGGCTCACCTTTGACCTGAGACAAAACTGGAATATATGGCAGAAAGAATCCCTCTTCTATTTTATGCAACTTCACAAGATACAATCCCATCAGTTTACTGGTAACATGCTAATTATTCTGGCTTTCCTGTGAAAATACAAGAGGGTTGGAGCCTGTCTATCACTGTGAATAACTGTCACTCAACTCTCACGCCTCAGAGACTCCTCTATATCTGGATGGCTTTCATAAAGCGGAGGTACTGTATGAATCACAAGGCCTATTCATGAAATATAATAGGGCCATCAAAAAAAAAGAGGAAGAAAAGAGAATGAGCTCATGCGTGTCTGCCCTGGCGGTTATGTCCATGCCGAAGCCCATCCAGTAATGTGATATGGACGGTGACCTCCACCATGAAGCAGCAGGGAGGCCAAGTCACATAAGGGGACAATGATGAAGCGCCTATCGAACACCCACTCATGGCCCTCCAGGTCATATTTCAAGATACGGATCACCTGGGCAGAGAAATTGGTCATAAATAGAAAAGCCATGTATGTGTCTCACTGCGGTTTTCTGGTCATGCCGATAACGGCACGCAACAGCGCTACGTAAGGTTTTGATTGCCTTGTTGTAATAATACAATTTTATTGCGTGAGGTTAACATAAGGGTCAGGGGCAGGGAGAAATTTATGAGCTTCCTGTTCTCCCGTATGACTGAACCAGAATTAATCAATACTCATTATATTCACTTCCACTCAAAGGCTGGGCAGAATAACAGCATTTTAAAATATGCCATATTTTGAGCTTCATTTGATTTCTCAGTTGATCAGTCTACTCTCGTCTGCTTCTGATCAAGGTCATCTGCCTCTGTCTTATTTACATTTCAGCAGCCAACCGTATGAATCACAACGGGATACATCTAGTGTACTGTAGAAGGAAGCTGAAATTGGTCAACACTAAATAAACAAGCGTTTCGCCAGCTGTAACACCACATGCATTAACAGACTCCACAACCACTTTTGATCGGTAATACAAAAGAGACATCTAATATACCAGTGCAGCAAACCTGCAATTGCCGAAAGGCTCCATCCTGAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95418 True 1303 lncRNA 0.43 1 9224271 9225573

Neighbor

gene id symbol gene type direction distance location
CI01000013_09007324_09008538 NA coding downstream 215522 9007257 ~ 9008749 (-)
CI01000013_08950324_08962808 NA coding downstream 261463 8949978 ~ 8962808 (-)
CI01000013_08732651_08797549 TMTC2 coding downstream 426722 8732651 ~ 8797549 (-)
CI01000013_08616374_08648611 BICD1A, BICD1 coding downstream 575660 8616204 ~ 8648611 (-)
CI01000013_08555865_08573521 FGD4, FGD4A coding downstream 650750 8555208 ~ 8573521 (-)
CI01000013_09293519_09305846 TTC38 coding upstream 67560 9293133 ~ 9305846 (-)
CI01000013_09309438_09335834 MICAL3A coding upstream 83799 9307036 ~ 9336077 (-)
CI01000013_09336832_09367107 MICAL3A, MICAL3 coding upstream 110999 9336572 ~ 9367304 (-)
CI01000013_09444914_09445539 NA coding upstream 218852 9444425 ~ 9446553 (-)
CI01000013_09734984_09737488 NA coding upstream 509314 9734887 ~ 9737488 (-)
G83883 NA non-coding downstream 5848 9217852 ~ 9218423 (-)
G83765 NA non-coding downstream 14818 9208818 ~ 9209453 (-)
G83762 NA non-coding downstream 16510 9206962 ~ 9207761 (-)
G83776 NA non-coding downstream 318709 8905313 ~ 8905562 (-)
G83768 NA non-coding downstream 329977 8893989 ~ 8894294 (-)
G83885 NA non-coding upstream 2392 9227965 ~ 9228672 (-)
G83764 NA non-coding upstream 18666 9244239 ~ 9244638 (-)
G83752 NA non-coding upstream 85824 9311397 ~ 9379623 (-)
G83894 NA non-coding upstream 171713 9397286 ~ 9397576 (-)
G83888 NA non-coding upstream 213868 9439441 ~ 9439916 (-)
CI01000013_07339918_07367774 NA other downstream 1841911 7339709 ~ 7367774 (-)
CI01000013_05883498_05884071 CHTF8 other downstream 3339899 5882049 ~ 5884071 (-)
G81547 NA other downstream 3480233 5739526 ~ 5744038 (-)
G81032 NA other downstream 4473710 4748809 ~ 4750561 (-)
CI01000013_04561253_04567647 MAP2K1 other downstream 4665368 4560340 ~ 4567647 (-)
G85170 NA other upstream 1254288 10479861 ~ 10480700 (-)
CI01000013_10564288_10569141 NA other upstream 1337886 10563459 ~ 10569290 (-)
G85188 NA other upstream 1366631 10592204 ~ 10595337 (-)
G85401 NA other upstream 1809459 11035032 ~ 11035466 (-)

Expression


Co-expression Network