G306840



Basic Information


Item Value
gene id G306840
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NW_019172846.1
NCBI id APWO02000057.1
chromosome length 1249306
location 37889 ~ 38206 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence


>TU422536
aaaaatgtatagaaattagcgagtgtgtgcgagtgtTTTCATGACATTAGACACTGCAATACtgaaatacattacattagtcATTTTTCGATGTAAATGATCTCTCTTGTCTCCCTTATTTTCCCATAGTTGTTGTGTAGTCattctttaaacattttaaacaaactctTTGGACTTTTTAGTTATAAAAATGGCTAAGAGTTGGGTTTTAATCTAAAATGAGAGATTTTCGGACatctacagtcatatga

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU422536 True 251 lncRNA 0.31 2 37889 38206

Neighbor


gene id symbol gene type direction distance location
cunh16orf58 cunh16orf58,LOC107729465,LOC107658510,LOC102793205 coding downstream 14462 8769 ~ 23427 (-)
cd2bp2 cd2bp2 coding upstream 19410 57616 ~ 65563 (-)
LOC103045793 mylpf,LOC103045793 coding upstream 31613 69819 ~ 76752 (-)
LOC103044774 LOC103044774,LOC108438020 coding upstream 54300 92506 ~ 101029 (-)
tbc1d10b tbc1d10b coding upstream 66539 104745 ~ 133593 (-)
LOC103044465 NA coding upstream 114592 152798 ~ 163938 (-)
G306934 NA non-coding upstream 78858 117064 ~ 117820 (-)
G306943 NA non-coding upstream 165847 204053 ~ 204448 (-)
G306951 NA non-coding upstream 189327 227533 ~ 232773 (-)
G306968 NA non-coding upstream 248692 286898 ~ 287535 (-)
G306995 NA non-coding upstream 384737 422943 ~ 424133 (-)
LOC111191304 NA other upstream 45493 83699 ~ 151251 (-)
smim22 smim22,si:ch1073-443f11.2,LOC107688153 other upstream 732914 771120 ~ 776215 (-)

Expression



Co-expression Network