G84215


Basic Information

Item Value
gene id G84215
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 10076454 ~ 10079336 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU95794
CCTCAGCAAGGTGAGGCATGGGGTTAAATCCACAGAGATGACATACCACACTTTTACATTCAGTGCAGGTGTTGTAATTAGGAGGGTCCTTTGAGCCCATGTTAAGGTCCACTTTACAGAGTGGGCAGGTGGATGGGTGAGGTACACTTTCAGGATGTTTTACTAATTTATCCTGTACAGATTCAGGTTTATCCTTTTGTGAAGTAGGCATCCTAGATACTTTGTCCTCATTGAGCTGCTCTGGTGTCTTTTCAACAGGTTGCTTGGTCTGTTTTGCAGAACGTATCTTGTTGGGTTCTGTTGCAACAGATCCTTTGCGAGATGTCGGTGGTGTAGCCTTGGCAGAAGCCACTGAGCCTTTACGGGAAGGTGGTGCTGTGGTAGCTTTCCCAGACTCAGTAGAAACCGTGGAGCCTTTCCGTGAAGTTGGTGGTGTTGTGGACGGCTCATCTGGAACAGCTGAGGAGATCAGATTAGATGCTGAGCTAAATAATGAGGATCCAAAGCCCAGAACTTTCCCAGAGACAGCAGAAACTGACTGTGGTGAGGGTGAACGAGATCTAGCTGTTTCTGTCAGGCCACCAAAGCCACCAAAGAACTTCCCTGTGGTTGACTCAGATGATTTAGAAGCAGGCTGTGCTTTAGGACCACCTAATCCAAAACCAAAGAAATTTGATTCCTGTTTTGGGGGTTCGACCTTCGTAGGTGGAGCAGATTTTACAGGAGTGGTTGTATCTTTGGGTGGCTGTTCTGTTTTTGCAGGCTCTGGCTGATTATTATTTTGCTTTTGAGGTTCTTTTCTTGGGGTGATCATATCAGTTGTCTTGGCATCAGTGGCTGTCTTTTGTTGAGGGCCTGGAATTGAGATCTCTTTCTTTATTTCCTGAGCAGGAGCTGCTTTCTTTTCAGCTGCAGCTGTGGTGAACTTCTCATCAGGTTTGGACTCAACTGGTGCTGTAGCTACCTTGTCAACTTTGGAAGGAGCTTGCTTGTCTGTCACTAAGGGAACTGGCTGGGGTGTCACTATAGGACTTTCAGATGTATTCATTCCTGCCTGTGCCCGTTGTACCTGGCAACTTAGGCAGAGCCATTCCTCAACCTCTGTTTGATGAGGCAGTGGATTAAATCCACATTGGCTGCATACTGTTGTCTTGCATTCAGTACATGTGTTAAAATTCTTGGTATCCTTGGAACCAATGTTGAGTTCCACTTTGCATAATGGGCAATTGGTCTTGACTTCTTTAGGAGCAGGTTTTTGGGTTGGTTTAGGTGCTGTGACTTCCTTAATTTCTGGTTTCTTCTCCACTGTTTTTTCAACATTTTGCACTGCATGTGGTTTAGTGTCTCCAACAGGTGGAATTTTACTAGAGTCTGGTGTGACTGCAGATCCTTTGCGAGATGACGGCGGAGTATTCCTAGCAGACATCTGGGAAACTGTGGATCCTTTTCGAGAAGTTGGTGGTGTTATGGAAGACTCATCCTGAACAGCTGAGTTGATCAAATTAGATGCTGAGCTGAATATAGAGGATCCAAAGCCCAGAACTCTCCCAGAGACAGCAGAAACAGACTGTGGAGAGGGTGAACGAGATCTAGCTGTTTCCGTCAGACCACCAAAGCCAAAGATTTTCCCAGTGGTTGACTCGGATGGCTTAGAGGAAGCAGGCTGTACCTTAGGACCACCAAATCCAAAACCAAAGAAACTCTGTTCCTGTTTTGGTGGCTCTGCCTGCGGAGGTGGAGCAGATTTTTCTGGAGACTTGTCAGACTCTTTTAAGAGTGTGTCAATCTCTTTATCTTTCTTTGGATCTGATGTTTCTTTCTTCTGAGAGGATGCAGGTTGTGCCTTTATGTTACTCTCTGGTGGTTTTGGTGATTCTTTCTTTTGGACATTCACTGAACTCTTAGTTTTATCAGGGATGGCCGCAGTTTGAATCTCTTTCTTTTGGGTTTCAGCAACATCAGAAACCACATTGGTTGAGACTAATGATGGTGGAGCTGGTGTTATACTTTCTGTTCTTGGATGCAGTGCTGAGGTGTAGACATTGTCAGTTTGTTCGTGGGTCTTTATTTTTGGAGGTTCTTGTAGTTCCATTCCATTTAATGCTCGCTGCGTCTGGCAGTTCAGACAAAGCCATTCGTTGACCTGTAATGACAGATTAAAAAAGAATTCTTGAATTCTTTCTTTCATGACATTGATGGAACATTGACATGATATTGATTTTTCTTGGAAACCACTAAACAAAACTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95794 True 2248 TUCP 0.45 2 10076454 10079336

Neighbor

gene id symbol gene type direction distance location
CI01000013_09681047_09683275 LRRC4, LRRC4.2 coding upstream 393021 9681047 ~ 9683433 (+)
CI01000013_09430170_09443518 RBM28 coding upstream 632431 9430170 ~ 9444023 (+)
CI01000013_09279917_09290301 TSPAN33B coding upstream 785694 9279917 ~ 9290760 (+)
CI01000013_09243644_09260619 TSPAN9A, TSPAN9B, TSPAN9, TSN9 coding upstream 815835 9243644 ~ 9260619 (+)
CI01000013_09178561_09180465 NA coding upstream 895297 9177107 ~ 9195268 (+)
CI01000013_10261599_10283287 NA coding downstream 180935 10260271 ~ 10283967 (+)
CI01000013_10335904_10336688 NA coding downstream 256568 10335904 ~ 10336896 (+)
CI01000013_10502138_10525511 GRM3 coding downstream 421354 10500690 ~ 10525674 (+)
CI01000013_10586449_10594082 NA coding downstream 506482 10585818 ~ 10594442 (+)
CI01000013_10756927_10790192 FRMD4A coding downstream 677591 10756927 ~ 10792761 (+)
G84194 NA non-coding upstream 39501 10030608 ~ 10036953 (+)
G84181 NA non-coding upstream 156208 9920024 ~ 9920246 (+)
G84180 NA non-coding upstream 158120 9918097 ~ 9918334 (+)
G84179 NA non-coding upstream 158791 9916805 ~ 9917663 (+)
G84171 NA non-coding upstream 172532 9901108 ~ 9903922 (+)
G84216 NA non-coding downstream 97 10079433 ~ 10081200 (+)
G84217 NA non-coding downstream 2958 10082294 ~ 10084049 (+)
G84242 NA non-coding downstream 38278 10117614 ~ 10117854 (+)
G84202 NA non-coding downstream 44424 10123760 ~ 10127752 (+)
G84265 NA non-coding downstream 107197 10186533 ~ 10187657 (+)
G84005 NA other upstream 474219 9601611 ~ 9602235 (+)
G82581 NA other upstream 741506 9329329 ~ 9334948 (+)
G82168 NA other upstream 2035111 8028338 ~ 8041343 (+)
G81994 NA other upstream 2738215 7335945 ~ 7338239 (+)
G84250 NA other downstream 135791 10215127 ~ 10215962 (+)
G84768 NA other downstream 2090653 12169989 ~ 12170818 (+)
G84790 NA other downstream 2105606 12184942 ~ 12201975 (+)
G84864 NA other downstream 2285713 12365049 ~ 12375905 (+)

Expression


Co-expression Network