G307144


Basic Information

Item Value
gene id G307144
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172846.1
NCBI id APWO02000057.1
chromosome length 1249306
location 917096 ~ 922717 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU422945
cacagattaaaccttttaaaataaaaaaattacagcttgtgactcagtttaactagaaatgtggagaggaccgaaattaactgaactgatcaggggttgagtaatcaaaagaaagaagtattaattaaaaattattaattgtgtaggccacttaggactaatttttactgatggaatatgtGTGGTCCATtgccttttagtaaaagctcataatactatttttaggtcacctacagtcattttgcagaatttgtgcaccctttgttcaattttaaatctattaaataaataaaaaaatatataatataaaagagtgcatttaaaggcaaaaaagacatgaaatcttaactttttttaaatatctagaaaagggtttttaatttggctgtattaaaagaatgacatatgtaggaatgtccacaacatttcagattctgataatctaattgtagtctgtaagtggttcacatgtggttattttagattttttgtaaacctgccttaaaatgtaagagatactgaaccttcgttgggctggtgggacgactttaagcggacggaggaaaatatcccttatttttaaatctaaaacttgacaggtatggcagATGGCCAGTGGGTTACTTTACTTGGAGCAGTGCTTTGTTCTTGTCACATATAGGCCTGGGGATTCTCCTCCCAACCACCAGAGGTCACTCTCACCAGAATACTGAATGTGGTTCTGCATTAGGCGGCCATTTTGTCTTTGTCCTTGAGCCTTTATAAGGGCAAGCTTGTGTGTGATTCTTTGCAAGGTCTTGTATGTATCTCTGTTAATGTTTGCTGCAAGTCTGAGCCtggattttgtttatatttatctgaTCTCTCGTGTTTCTGAACTTTTGGACTGtgttttggatttttgcctTTGGATTACCCTCTTTTGTACTTTTGCTGTGTGTTATATTAAACCTGCACTTGGATCCTATAAACCTGGTCTGCTGGGTCTTTCATGACAGTTCTTCAGCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU422945 True 1009 lncRNA 0.35 2 917096 922717

Neighbor

gene id symbol gene type direction distance location
LOC103045885 slc16a6,LOC108438015 coding downstream 5246 900961 ~ 911850 (-)
rgs9 LOC108438013,LOC108278703 coding downstream 88465 804649 ~ 828631 (-)
LOC103025515 si:dkeyp-72e1.9,LOC108438022,LOC107721498,LOC107601283,LOC107688120 coding downstream 246391 556386 ~ 670705 (-)
pdxdc1 pdxdc1,LOC107601286 coding downstream 432194 452594 ~ 484902 (-)
LOC103041204 gspt1l,LOC108438004,LOC107721494,LOC100304847,LOC107654506,LOC107590378 coding downstream 468436 432157 ~ 448660 (-)
wipi1 wipi1,LOC107590389,LOC105899989,LOC107719990,LOC107688112 coding upstream 5335 928052 ~ 947398 (-)
LOC103021341 zgc:86896,LOC108436955,LOC108259475,LOC105899990,LOC107601274,LOC107590453,LOC104927173 coding upstream 26952 949669 ~ 965473 (-)
dus1l dus1l,LOC107654489,LOC107601270,LOC107688109,LOC107590391 coding upstream 106375 1029092 ~ 1043561 (-)
slc16a3 slc16a3,si:ch211-234h8.7,LOC107684059,LOC102306792,LOC101481224 coding upstream 167834 1090551 ~ 1097798 (-)
scpep1 scpep1,LOC107654482,LOC107601266,LOC107590395,LOC107688106 coding upstream 198182 1120899 ~ 1127466 (-)
G307132 NA non-coding downstream 22378 883222 ~ 894718 (-)
G307130 cog1,LOC107601277,LOC107721521 non-coding downstream 122266 793384 ~ 794830 (-)
G307100 glyr1,LOC107590383,LOC107688117,LOC107721499 non-coding downstream 162716 714416 ~ 754380 (-)
G307097 ppl,LOC107601282,LOC107688119 non-coding downstream 185225 687873 ~ 731871 (-)
G307041 NA non-coding downstream 360838 555377 ~ 556258 (-)
G307150 prkar1a,prkar1aa,LOC107721504,LOC107654492,LOC108274040,LOC107590390 non-coding upstream 47440 970157 ~ 1044317 (-)
G307190 csnk1d,LOC106596082,LOC102211647,LOC103154369,LOC103024472,LOC108259482,LOC107720075,LOC107590392,LOC107601268,LOC105899999,LOC107654491 non-coding upstream 141340 1064057 ~ 1078972 (-)
G307200 engase non-coding upstream 179357 1102074 ~ 1106222 (-)
smim22 smim22,si:ch1073-443f11.2,LOC107688153 other downstream 140881 771120 ~ 776215 (-)
LOC111191304 NA other downstream 765845 83699 ~ 151251 (-)

Expression


Co-expression Network