LOC103044774 (LOC103044774,LOC108438020)


Basic Information

Item Value
gene id LOC103044774
gene name LOC103044774,LOC108438020
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172846.1
NCBI id APWO02000057.1
chromosome length 1249306
location 92506 ~ 101029 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007235345.3
ggggcttgcTGCGGTACAGGTGGAGATGAGGGAGTGCAGCTGGAGGAGTCTTCTGTTACCAGGAAGTGGGTCgtgttatttatatttcagCACAGTGGAGGAGTGAGGTTGAAACAGGACACCTGCACAGTATCCCACAATCCTCTGCACACCGCTCACCTGAGGATGGACGGAGGAGGCCGGGCGGCAGCACAGCGGCatcacagcagcagcacagccgGGGCTCTGagggcagagtgagatTCACTGAGTAAACCTGGTGGATCCTGCATTCAGTGTTTAGCTCCACTCCAGGGGCGCTGTGATGAAGATCCATAAGAAGATTCTGACACACTACCTGTCCTGTACTTCACCTGTTGATAAAGAGGGTTATCTGTACAAAAAGAGAGAGCGGAACACCTCGTACCTGCGTCGCTGGTTCGTACTGAAGGGGAACCTGCTGTTCTATCAGGAGCGTCCTGCTGACCGCAGTCTCCTGGGGGTCATCGTTCTGGAGGGCTGCGTGGTGCAGGCCGGAGATCCAGACGGactgttctctttctctttagtgTTCACTGGACCAGGCCTGAGAACCTACAGACTCGCTGCAGAAGACCACCTGACCCAGGAGAGCTGGATCAGCGCCTTACTGACCGCCAGCCACATCTACATCTCCCTGCTGGTTAAAGATCTAGAGAGACTTTACAAAGAAGCTAAGCAGGAGAAAAGTCTCGCTGGCTCCTCCCCCTCCTCAGTGACTGGGTCATGCGTTAGGGCCTCCAGCACTGCCATGGCCTTCAACACGGGCCCACCTTTCTTCTTCCAGAGACCCCCAGCGTTACCCAGAGAGAAGAGAAGCTACAGCGCCAGTTCTGCCCTGCAGAGTCCAGCCGTCCACACCCCCGTCAGAACCACCAACAAGAGATCCCCCAAACTCTGGCCCAAGAGGAACGCCCACGTCACGCCTCTCAACGGCCCCGCCCCTCCACACGGGGAGTGGCCTTTAATGTGCTTTGATCCACTGGAGGAATTCAGTAAACTGCATGAGTATTATGGAAATGAAGTCAAGCAgctgagagctgattggctgaagagTAAACGGTTGGAGGAGGGGCATGTTGAAGAGGATCTGATCGATTTAggataaacatttaatataaattatttaaaatctgcTGCCTTTTTTACCTCACTTTTCTAATTACTCCAAATCCAGTTCCTCAtccaagacatgtttggtgtctgaTGTTTGTGCCTGAGCTACAAtgataatgtagctaacaagtaatggaatCTTATGGCCACCAATTAGCGTGCTGCTACAGCATGCCTAAATTATCTCGCAGACTTTTCTCAAACCAtgttctaataaaaataatatctctA

Function

NR:

description
sesquipedalian-1-like

GO: NA

KEGG:

id description
K23791 PHETA; sesquipedalian

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007235345.3 True 1365 mRNA 0.51 4 92506 101029

Neighbor

gene id symbol gene type direction distance location
LOC103045793 mylpf,LOC103045793 coding downstream 15754 69819 ~ 76752 (-)
cd2bp2 cd2bp2 coding downstream 26943 57616 ~ 65563 (-)
LOC111191303 NA coding downstream 39193 36305 ~ 53313 (-)
cunh16orf58 cunh16orf58,LOC107729465,LOC107658510,LOC102793205 coding downstream 69079 8769 ~ 23427 (-)
tbc1d10b tbc1d10b coding upstream 3716 104745 ~ 133593 (-)
LOC103044465 NA coding upstream 51769 152798 ~ 163938 (-)
abcc1 abcc1,LOC107654509 coding upstream 175600 276629 ~ 319839 (-)
nde1 nde1,LOC107654507,LOC107688124,LOC107601288 coding upstream 291169 392198 ~ 417382 (-)
pirt pirt,LOC103042629 coding upstream 323297 424326 ~ 427020 (-)
G306834 NA non-coding downstream 10389 32740 ~ 82117 (-)
G306934 NA non-coding upstream 16035 117064 ~ 117820 (-)
G306943 NA non-coding upstream 103024 204053 ~ 204448 (-)
G306951 NA non-coding upstream 126504 227533 ~ 232773 (-)
G306968 NA non-coding upstream 185869 286898 ~ 287535 (-)
G306995 NA non-coding upstream 321914 422943 ~ 424133 (-)
smim22 smim22,si:ch1073-443f11.2,LOC107688153 other upstream 670091 771120 ~ 776215 (-)

Expression


Co-expression Network