tbc1d10b (tbc1d10b)


Basic Information

Item Value
gene id tbc1d10b
gene name tbc1d10b
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172846.1
NCBI id APWO02000057.1
chromosome length 1249306
location 104745 ~ 133593 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_007235348.3
GTCTGTAGTAGGAACTAAGTTTCGCGGGTCGGAGGTCGAAGATACAAAAACCGCTTGAAGCTCGGCCGGTGTGTCTCTGTGTGGCTGTGGAGCTGTTTTATAGCGCGGAGTGCCGGGCGGACCGGGCGGGCCGGGTTCAGTGCCGGGATTCAGCGCTGGGTGTTTACGGGCGCTTCACCGGGAGCGGAACTAGAGGACTGACACCGATCCCAACCGGAACCTGCAGACAgacaggctaagctaagctaacccaACCCGCTACAGAGCTGCAGGAGGCGGGGGGAGGTCTGAGTGCTGTTCGGGCTCTTCTGGACGTTGTGGCCTTTTATACGGAGGGATTTTCCTCCGGGGCAGAGCGGCGGCTCGGCGGACGGAGCTGTGGCGGGGGGAAGCGGATAAACACCCGCTGGGCGCCGGGCGGAGCTCACGCAGCTTGCGGGACTGCAGGAGTGGAGTAGCAGAGGGCACCAATGGCTGAGGTTTCTACCCTCACCCCGTCACCTCCAGCCATGACGGAGCAGCCGGTCTCCTCTCATCCTCTTCCTTCAGAGTCCCCTAAAACTACCCCCATCCCCAAATCCGCTCTGTACGGGGACAGGGCCGTGATGGGCAACCCCACCTTACCGGCAGGACTTAGAGAGACCGCCATTTCTCTGTCGTCCTCTGTGGAGGTCACTCTCAATTCTGCCCAAGGCAGCTCACCTTCAGCAGCAGCTTCACAGAGCACTGATGTTCCGATGGAGGCAGACGCAGCAACATGTTTAGAGATAGAAACATCGGGAGCTTCCAATGAGCCTTTAAATGAGCACAGTGGTGAACATGAACCCGAAGGCACAGTAAAAGAACAGCAGATGCCGTCTTCTCCAGGACATAATCCCAGTGCTAATCCCCACCCCAGTGCTTCAGCTAATAATCCAACAACTTCAGCAGACGCCCCTCCTCATTATCCTCCACCTCCTGTACCCACAGCTTCAGAAAATACAGAGAACATAGAAAACCCCTCAAATCCCAACGCCACAGTCCCAGACCCGCAACCAGAGGGCAATAAAATGCCTTTAGAAGCACAACAGCCAACAACAATGAAGCAGCCAGATCAGAACCCAAACCACACTCTGTGTCAAGATCCTCAACCCAACACTTCAAGCCCCAAAACCCTTCCCGAGCCTCCCTTCACCCCCTCCAAGATTGAGCCTCCGTCACTGATCATACCTGATTCAATTCCCTCTCTCGCCCTGCCCTCCGTTTACGCCCGGCCCGCCCCTGACACGCTCAGCTACCTAGAGTCAGCTAGTCTGATGTCCGGAACACTGGAGTCCCTGTCTGGCCTGGGGGAGGACGGCAGCTCTGTGGGTTCAGATTCTGAGATCAACGGACAGGTCTTCAGGCGAACGGATAAATACGGCTTTCTGGGAGGAGCACAGTACACCGATACCCTCGAGAAGGACGTCAGCGTGGAAGTGGCGAGGCACCGGGAGATGAAGTGGTTGGACATGTTTCAAAGCTGGGACAAATGGATCTCCCGACGCTTCCCTAAGGTGAAATTGCGGTGTCGTAAGGGCATCCCCTCCTCTCTCAGAGCAAGAGCCTGGCAACTTCTGTCCAGTAGCGAGGATCTACTGAAGTCCAACCCTGGCAAGTTTGAGgagctggagagagagcaaggtgaTCCCAAGTGGCTGGATATCATAGAGAAAGACCTGCACAGACAGTTTCCTTTCCATGAGATGTTCGCCGCACGAGGGGGCCACGGTCAGCAGGATCTGTACCGTATACTAAAGGCCTACACCATCTATCGGCCTGATGAAGGCTATTGCCAGGCTCAGGCTCCGGTGGCTGCAGTGCTGCTAATGCACATGCCAGCAGAGCAAGCCTTTTGGTGTCTAGTGCAGATATGTGAGAGATACCTGCCTGGCTACTACAGTGCTGGTCTGGAGGCGATTCAGCTGGATGGAGAAATATTCTTCTCTCTGTTGAGGCGAGTGTGTCCCATGGCTTACCGTCATCTGAAAAAGTTTAAGATCGACCCCATCCTGTACATGACGGAGTGGTTCATGTGTATCTTCTCACGCACGCTGCCCTGGGCCAGTGTTCTCCGAGTCTGGGACATGTTCTTCTGTGAGGgGGTGAAGATTGTGTTTCGTGTGGGGCTGGTGCTGCTGAAGCAGATGTTGGGTTCAGTGGATAAACTGCGGGAGCTGCAGGGCATGTATGAAACGATGGAGCGCCTCCGGAACATACCACCAGAATCCATCAGAGAAGATTTACTGGTTCAAGAGGTGATCACTCTCCCGGTGACGGAGGCCCTGATCGAGCGAGAGTGCAGCGTTCAGGTGCGGAAGTGGCGCGAGTCTCGAGGTGAGCTAACCCACCAGCCCGGCCGCCGGCTCCACGGTACGAGGGCCATCCACGAGCTGAAGCGACGTGCGGCCTCCATTAGTTCTGGTGGCAGCCTGTCGTTTCTGGGCAGTTACGTGCCGCCCCCCGGACCCCTGCGTGCTTCCTCAAGCCTGCTGTCTCTGCCAGGCTTCCGCAAGTCCAAAACACCCTTCTCTCAGGCCAAGAAGGGCTCTTTTTCAGGAGCTTCTGGCCAGGAGGCCTTTTCTCTGCAGGGTTGTGCAGGTGGAATGTCCACTGTCTCCTCACCTCCTCTAACTGGAGCCTCTAGGCCACCTTTATCTACAACAGCAGCGCCACCTGGCAGTGCAGTAACAGCGAGGCCACTCGTCCATCACGGGCCGAGTCCTTTAGCATCGAAACCAGGTTCAGCAGCAGCCACCGCAGCATCTCCAGCTCCAGGAACTTCACCAGGAGCTCCTGCACCACAGCCTGGGCCAGCAGCTTCCACACATTCAAACACTCCTACCCCAAACACCCCAAACACACTCCAGCCAGCCCCCAAAGTGGTCTCAGAGCAAGTCACGCCCACTATCCCCTCACCCATGGCTGTCAATGCCCCACTACCACCTTGCACGGTGGAGGATGAGGGcaagaataagaagaagaagagcaaagaagacaaaaagaaagagaaggaggaggagaagcagAAACTAAAGGATAAAAAGGAACGGGAGAagcaagagaaggagagagtcaAGAAGGAGAAGGAAAGATCggagaaggaaaagaaaaaagagaaaggagggaagaagaaggagaaggatAAAGAGAAAGGAGGAGGGCCAGAGCCCGAGGAGAAAAACGGGGCCGCGGCTTCAAAGGATTCGTAG
>XM_022665891.1
ATGGCTGAGGTTTCTACCCTCACCCCGTCACCTCCAGCCATGACGGAGCAGCCGGTCTCCTCTCATCCTCTTCCTTCAGAGTCCCCTAAAACTACCCCCATCCCCAAATCCGCTCTGTACGGGGACAGGGCCGTGATGGGCAACCCCACCTTACCGGCAGGACTTAGAGAGACCGCCATTTCTCTGTCGTCCTCTGTGGAGGTCACTCTCAATTCTGCCCAAGGCAGCTCACCTTCAGCAGCAGCTTCACAGAGCACTGATGTTCCGATGGAGGCAGACGCAGCAACATGTTTAGAGATAGAAACATCGGGAGCTTCCAATGAGCCTTTAAATGAGCACAGTGGTGAACATGAACCCGAAGGCACAGTAAAAGAACAGCAGATGCCGTCTTCTCCAGGACATAATCCCAGTGCTAATCCCCACCCCAGTGCTTCAGCTAATAATCCAACAACTTCAGCAGACGCCCCTCCTCATTATCCTCCACCTCCTGTACCCACAGCTTCAGAAAATACAGAGAACATAGAAAACCCCTCAAATCCCAACGCCACAGTCCCAGACCCGCAACCAGAGGGCAATAAAATGCCTTTAGAAGCACAACAGCCAACAACAATGAAGCAGCCAGATCAGAACCCAAACCACACTCTGTGTCAAGATCCTCAACCCAACACTTCAAGCCCCAAAACCCTTCCCGAGCCTCCCTTCACCCCCTCCAAGATTGAGCCTCCGTCACTGATCATACCTGATTCAATTCCCTCTCTCGCCCTGCCCTCCGTTTACGCCCGGCCCGCCCCTGACACGCTCAGCTACCTAGAGTCAGCTAGTCTGATGTCCGGAACACTGGAGTCCCTGTCTGGCCTGGGGGAGGACGGCAGCTCTGTGGGTTCAGATTCTGAGATCAACGGACAGGTCTTCAGGCGAACGGATAAATACGGCTTTCTGGGAGGAGCACAGTACACCGATACCCTCGAGAAGGACGTCAGCGTGGAAGTGGCGAGGCACCGGGAGATGAAGTGGTTGGACATGTTTCAAAGCTGGGACAAATGGATCTCCCGACGCTTCCCTAAGGTGAAATTGCGGTGTCGTAAGGGCATCCCCTCCTCTCTCAGAGCAAGAGCCTGGCAACTTCTGTCCAGTAGCGAGGATCTACTGAAGTCCAACCCTGGCAAGTTTGAGgagctggagagagagcaaggtgaTCCCAAGTGGCTGGATATCATAGAGAAAGACCTGCACAGACAGTTTCCTTTCCATGAGATGTTCGCCGCACGAGGGGGCCACGGTCAGCAGGATCTGTACCGTATACTAAAGGCCTACACCATCTATCGGCCTGATGAAGGCTATTGCCAGGCTCAGGCTCCGGTGGCTGCAGTGCTGCTAATGCACATGCCAGCAGAGCAAGCCTTTTGGTGTCTAGTGCAGATATGTGAGAGATACCTGCCTGGCTACTACAGTGCTGGTCTGGAGGCGATTCAGCTGGATGGAGAAATATTCTTCTCTCTGTTGAGGCGAGTGTGTCCCATGGCTTACCGTCATCTGAAAAAGTTTAAGATCGACCCCATCCTGTACATGACGGAGTGGTTCATGTGTATCTTCTCACGCACGCTGCCCTGGGCCAGTGTTCTCCGAGTCTGGGACATGTTCTTCTGTGAGGgGGTGAAGATTGTGTTTCGTGTGGGGCTGGTGCTGCTGAAGCAGATGTTGGGTTCAGTGGATAAACTGCGGGAGCTGCAGGGCATGTATGAAACGATGGAGCGCCTCCGGAACATACCACCAGAATCCATCAGAGAAGATTTACTGGTTCAAGAGGTGATCACTCTCCCGGTGACGGAGGCCCTGATCGAGCGAGAGTGCAGCGTTCAGGTGCGGAAGTGGCGCGAGTCTCGAGGTGAGCTAACCCACCAGCCCGGCCGCCGGCTCCACGGTACGAGGGCCATCCACGAGCTGAAGCGACGTGCGGCCTCCATTAGTTCTGGTGGCAGCCTGTCGTTTCTGGGCAGTTACGTGCCGCCCCCCGGACCCCTGCGTGCTTCCTCAAGCCTGCTGTCTCTGCCAGGCTTCCGCAAGTCCAAAACACCCTTCTCTCAGGCCAAGAAGGGCTCTTTTTCAGGAGCTTCTGGCCAGGAGGCCTTTTCTCTGCAGGGTTGTGCAGGTGGAATGTCCACTGTCTCCTCACCTCCTCTAACTGGAGCCTCTAGGCCACCTTTATCTACAACAGCAGCGCCACCTGGCAGTGCAGTAACAGCGAGGCCACTCGTCCATCACGGGCCGAGTCCTTTAGCATCGAAACCAGGTTCAGCAGCAGCCACCGCAGCATCTCCAGCTCCAGGAACTTCACCAGGAGCTCCTGCACCACAGCCTGGGCCAGCAGCTTCCACACATTCAAACACTCCTACCCCAAACACCCCAAACACACTCCAGCCAGCCCCCAAAGTGGTCTCAGAGCAAGTCACGCCCACTATCCCCTCACCCATGGCTGTCAATGCCCCACTACCACCTTGCACGGTGGAGGATGAGGGcaagaataagaagaagaagagcaaagaagacaaaaagaaagagaaggaggaggagaagcagAAACTAAAGGATAAAAAGGAACGGGAGAagcaagagaaggagagagtcaAGAAGGAGAAGGAAAGATCggagaaggaaaagaaaaaagagaaaggagggaagaagaaggagaaggatAAAGAGAAAGGAGGAGGGCCAGAGCCCGAGGAGAAAAACGGGGCCGCGGCTTCAAAGGATTCGTAGTTGTTGGGCATCTTCGAGGTTCCTGGCAACAGAGGGACATGATAACAAAAGAGTTAGTCAAGCAAGGGCAGTGAAAATGAGGAGAAAAGAGATGGACAgctggatgaatggatggatgatccTGTGTGAAGTCCATTTCATCTCGTGAAAATAACTGGATCACATATTATGGGCTGTGCTAATATGTAATTGGCCTCAGGCAGCACCTCCCCCATTGACTCCAGTGCATTCTGCCATTCTGCAGCGATCTGTCCGCAGTGCTGTGGTTTCTATAGGGGATATTTAACTACACGTACAGTCAGTCCTACATACAtctgtacttgttttttttatttgttatttttttcccttttttcctcaTTGTGGTCTTACTGGGGGAGGGGGTAATGGGGGAGTAACTGTGTGTGGGTCTGGGTTCTTCCACAGTGTAAATAGGTCAGTTTGCGTGTTGACTGAATATGAGCCTGGTCTGTGCCCATTTCCTGTGTACTGTAGTATTACAGTAGGTCGCCCagaacaccaaaaaaaaaaaacggggcgtttaaaaaaataaaaaaataaaacaagataaaataagataaacatTTCAACCCATAAAATCAGAACTCCAATAAAGCAGGCGGTGACTATAGTGATTGTAGtagaattaataataacattagtAGCAGATGTGGAgggggatatatatatatatttattgtaaagtgttgttAGTGTGTGCGCTCATATGCTCatacttgtgtgtgtttgtttatatgtttgtaCCTTGGTAGTTTAGTGTAACATGTCGTCGTCGTCGTCCGTAGTGTTGCTAACTGCTCTAATCTCTTCTGCTGCCCCAAATACTCGCActccgttttacagaaggaaacAGTGAGCATTACGTGGGTTTGGCCACAAGAGGGAGCTGGGAAGACTGAATTCGCAATACGAGAAACGTTACGTATGGTACTGTGGTCAGAATAATCTGGtcagtataatgtataatgtataatgaatTTGCTGTCCTGTCTGACAGAAAGATGAGGGAAATATGCATCAGAACCACATTTACAGCATCTTTGATAAGATAACTTCAGATAttccttaattaattaattcactaAACGCAATGGAATATCTTTACGTTTACTTTACAGTCAtcgtgaaggaaaaaaaaaatgctggcaTCTCAAAGAAATAGAGATGCAAACTCACACTTCTTATATATGTAATAGGTGTTTTAGATTTGCCCCTGAGCTAAACTGTTTAAACTTCACCTTCTCTCTAACTTTATAGGTTGTATAGGTTTTGGGCTTAACTGGAATTGAATAATAAAAGGAGAGttattccttttttaaaaagtgttaacaGCTGAACTGTAACTGTTAACACATTTAAAGGGGAGAGTTTAGTTTACTTGACTTTTCTCAGACATGTCTGtggactttatttatttgttagatTATGAAGGATTTAGTCTGATGTTGCACTGAAcccttattaatattattattcttcttcttcttcgtcctAAAAGCACCAGTAATCGTGACCACTTCGATGTGTAGTGGTTGAGTCCGGTGCAGACGTGACGCCACTCAGCACAGCTCATGCTCTGTTGTAGCTTTAAACTTTTGGAGCTTTCACCTTATTTCAGTCAGTagtcctgtagtgtattaatgTACAGCGTGCTAATTTAAGCAAATGAACAGTATATTGTGTATTATGCCTGttctttatcttattttagattgGATTGTTATTTTTCTATGCAAGAATTCAGCGGCCTGGTCGACTGGAATAGCGAAGGAAGCTTTTCGGAGTGAGGTTTGCGCGAGAGTATTTTAAATGAGTCcttttaaaatcttattttttttgaagTGCTAAAAGTTATTTTTGCACATTGCTCATTTTCTTTCTCCCCATGTCCTGGAGAACAAAGCCAAGcagtacttatttattttagactttttaaaaatcacaCTTTCTTTAACAGTATTTCTTAACAGGGCTGGTTTACTCCTTCTTTAAGGCTTTCTCACAGGTTTGGATAGTTTTGTTGCTTAGTGCCCATCTCTGTATCTTTGTATCTCTGTTAAAGGGGTAAATATTTTTGTGATgattatttaaggtggagcagCAGTAAGCGTGGTCCCAGactgtactgtaaaatatatgggAGGCATTTCTGCGTTGTAAAGAAACTCTGAGAATCTTATTCTGGACACTCACtggaacatttatttaattgaatttggATGACCAGCAGTGTTATGTGATTTTGAATTAAATATGCACTGTAGTCAAGTGTAAATTAACTCCACCTTAATGCACTCACTGCTCAGTATTACAtaactaacttaaaaaaaaaaagaaaaacgcacCAAGGCAGCACTGTGGGACTCAGAAGATGCTGTCCAGGTACTGTAAATGTCTACAGCTACAGCGCACCAACAGACACTGATTCACTGAAAAGCTGGTGTCGTTATGGACAAAGTGTCGTTATGGACATGAGTAACATTGTAGAACTCGTAGAATCATGTTGTCGTTGCTCATCATTTTTCTCCCCTGTCTTTTGAAGTTCTGGTTTGCTGGTCTGCTGGTAGTCATACCTCCTCCGTGCTGCAGGTGGTGCCCTTTCCCAGAAAATCTGATGCTTCCTCCAGGGGTGCCGCTCTTCAGGCTGAAAGTCAACTGAGAATGTCTATGCAAACCCCAAAGGCTCTCAGAGGCTCCCCAGGATCAGAACCTCCACATTCCTACCACCAGTGACTGGCTTTGGAGCCACTGAAGGTGCAAAGCACAAAAACGACATGCTCCATCCACTCTGCTGATTCTTGGAtcgcactgaacacacacacacacacacacacacacagtggagtGCAGTGGAGACACCCCACCccctattaaaaaaacagagacagtcaCTCACCAGGACTTCATGCAAAAACATCTGAAACTGCTCCACCAGTCAGTTCGTCTTAAACATTTCTGCTTCAGTCCCTCGTTCAGTGTAGTCTGTCCATCTCTCCGTTTCTAAGGTTCTCAGTTGGTTTAATCATttcaatttacttttttattctaatttcatTCTTAGGAGCTCTCATTCCAGCCTGCAGTGTGTTGTCTTCTCGTTTTTGTAAGTTTACATGCAACCACAAatccattaaaatgaaaaaaaaaaaaaaatcatacatagtCATTCCTTACATGCAGAAGAGGCAAAATGTACACAGTGtatttaattaatgattaaaacaaTGACAGTTGTGATGAATAATAAACCGTAATATATTAAATCACACCCtt

Function

symbol description
tbc1d10b Orthologous to human TBC1D10B (TBC1 domain family member 10B).

NR:

description
TBC1 domain family member 10B

GO: NA

KEGG:

id description
K19944 TBC1D10; TBC1 domain family member 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_007235348.3 False 3230 mRNA 0.56 10 108039 133593
XM_022665891.1 True 6054 mRNA 0.46 9 104745 121428

Neighbor

gene id symbol gene type direction distance location
LOC103044774 LOC103044774,LOC108438020 coding downstream 3716 92506 ~ 101029 (-)
LOC103045793 mylpf,LOC103045793 coding downstream 27993 69819 ~ 76752 (-)
cd2bp2 cd2bp2 coding downstream 39182 57616 ~ 65563 (-)
LOC111191303 NA coding downstream 51432 36305 ~ 53313 (-)
cunh16orf58 cunh16orf58,LOC107729465,LOC107658510,LOC102793205 coding downstream 81318 8769 ~ 23427 (-)
LOC103044465 NA coding upstream 19205 152798 ~ 163938 (-)
abcc1 abcc1,LOC107654509 coding upstream 143036 276629 ~ 319839 (-)
nde1 nde1,LOC107654507,LOC107688124,LOC107601288 coding upstream 258605 392198 ~ 417382 (-)
pirt pirt,LOC103042629 coding upstream 290733 424326 ~ 427020 (-)
LOC103041204 gspt1l,LOC108438004,LOC107721494,LOC100304847,LOC107654506,LOC107590378 coding upstream 298564 432157 ~ 448660 (-)
G306834 NA non-coding downstream 22628 32740 ~ 82117 (-)
G306943 NA non-coding upstream 70460 204053 ~ 204448 (-)
G306951 NA non-coding upstream 93940 227533 ~ 232773 (-)
G306968 NA non-coding upstream 153305 286898 ~ 287535 (-)
G306995 NA non-coding upstream 289350 422943 ~ 424133 (-)
G307001 NA non-coding upstream 360945 494538 ~ 508941 (-)
smim22 smim22,si:ch1073-443f11.2,LOC107688153 other upstream 637527 771120 ~ 776215 (-)

Expression


Co-expression Network