LOC103044465


Basic Information

Item Value
gene id LOC103044465
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172846.1
NCBI id APWO02000057.1
chromosome length 1249306
location 152798 ~ 163938 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022665898.1
TCCAAAGTCATACACGGGGAGGCAAAAAACAGAGGTAATCCAAATAATCAGAAACGGTAACAGTCCAAGTAATACACGGATCCAAAAAGCAGAGAGAAGGCAAAAGTCGAGGTATAACAGTCCAGAGAGTCAAAACCAGAAGATTAAAAAATAGGAATTATAGGAATTCGCTTTGTAATGAGGGCTAACCAATCAATTACTCGGCACAGAGTGTAAGTGAAGGGGGTTTTTATGGTGTGGGTAATCAATATTCAGGGCTTCCGGGTGGTGGCAGGTGAACAGGTGAGTGCATGATGTCAGAGTATGGTGTGTTCTGGGAAGTGTAGTTGGGAGACTGGAGATCGTCAGCAGCGCTGaatgtgggagagacaggagtgctttcagcaccagacctGACAGTAGgtaaccatgaattctgctccCTATCAAGGTATGAGGTTTAGGAGTCAAACCCTTTTTCACACAGagttagattggtttggatagattttttctctgtttatgaTGATTCAGCCATTTTCTTATCTATTTACAAAgcgtttttattttatctgctttacagaatgcagaaatccacagcagAACCTCCAgagcccagctgtgtgtctatgaagagtaaCAGGTCAATATTTGAACCTCCTACCTTCAGTAATAAAGGAGAAcctccagaacccagctgtgtgtctataaAGAGTAACCACTCAATGATTCAACCTCCTACCTTCAGTAATAAAGGAGAAcctccagaacccagctgtgtgtctatgaagagtaaCCACTCAATGATTCAACCTCCTACCTTCAGTAATAAAGGAGAAcctccagaacccagctgtgtgtctatgaagagtaaCAGGTCGATGCCTGAACCTCCTGCCTTCAGTAATAAAGGAGAACCTCCAgagcccagctgtgtgtctatgaagagtaaCAGGTCGATGCCTGAACCTCCTTCCTTCAGTAATAAAGGAGAACCTCCAGAGCCCAGGGGGAGGAGTGGTCTGGTCCAGGATCAGTgcaggtgtggagtgtgtgagcaGCTTCTGACAGATCCAGTCTCGATCACCTGTGGACACAGTTTCTGCAGACAGTGTATCAGCAGCTTCAGGAACAAAACTGCTCTGTTAGGAGACTTTATCTGTCCCTGCTGCAGAAAGAACTCTAGAACACGTCCTGCTCTACATCCACACATAGAGGAGTCTAGAAAGCAGGATTCCTACCAACCAGTGGATGATGTTCTGCAGAGAGTCTTTCAGAAACACAAAACCAGCATGAAGAACAGGTACGAAAGCTTATTTGAGGGAATCAAAACACCAGAGAATAGAACCCTCCTGAACAGGATTTACACTCAGCTCTACAtcatagagggagagagtgaaggagtTAATAAAGAACATGAGATTCTAAAGATGGAGAAACAATCCAGCAGATACTTACAGGACACTCCAATCAACTGCTCAGATATTTTTAGGCCTGAAGAAAATCCTGATCGAGAAACTGAAGATGAGCACATTAGAGCTGCAATGCTTAGTGGTCTTGGagaaatcaaaataaaagaaGACAAAGGACCAAAGAAGATCCGAACTGTCCTGACTAAAGGAATTGCTGGAATTGGGAAAACTgtctctgtgcagaagttcattctTGACTGGGCTGAAGGAAAAGCCAACCAGGATGTGGATTTCATGTTTGTGCTTCCGTTCCGAGAACTGAACCTGATTAAAGATGATCAGTACAGTCTTCATAGACTTCTGTGTGCCTTCCACCCTGATCTCAAAGATCTGGACCCTAAGATCTACAATACATGCAGAATTGTGTTCATCTTTGATGGACTGGATGAAAGCAGAATTCCACTGTACTTTGAGAGGTGTAAGAAAGTATCTGATGTAACCATGACATCATCAGTTGGTGTGTTGATATCAAACCTTCTTGAAGGCGAGCTGCTGCCCTCTGCTCACATCTGGATTACCTCCCGGCccgcagcagccaatcagattcctcCTCGGTACATCAGCCGTGTGACAGAAATTCAGGGATTTAATGAGCCACAGAAGGAGGAGTACTTTAGGAAGAGGATCAGTGACCAAGACCAAGCCCAGAAAATCATCTCCCACATTAAGACAGCGAGGAGCCTCCACATCATGTGCCACATTCCcgtcttctgctggatctcagCCACTGTGCTTCAGCAAATCCTGAGACAGAGTGATACAGAAATCCCTAAAACTCTGACTGAAATGTACTCCCACTTCCTGATCACTCAGACCAGCATGAAGAATGAGAAGTATGAGGGAAGCTATGATAGGGATACAGAAGAATTGCTGGAATCCAACAGAACTGTGCTCCTGAAACTGGCTAAACTGGCTTTCTATCAGCTGATGAAGGGGAATGTGATGTTCTATGAAGAGGACCTGAGAGAGAGCGGTATTGATCTCACAGAGGCCTCAGTGTATTCTGGGATTTGCACTGAGATCTTCAGGGAAGAATGTGTGCTTTATCAGAGGAAGGTCTACAGCTTTGTTCATCTGAGCTTTCAGGAGTTCCTGGCTGCTCTGTATGTGTTTCACTGCTACATGATCAAGAACATGGAGGTACTGGAAGTTTTTGAAAAATGGATCAGTATGTTTGAAAATGTTTCACTGGATAAACTCCTGTGTGGAGCAGTGGATGAAGCCTTAAAGAGTCAGAATGGACACCTGGATCTTTTCCTCCGTTTCCTGCTGGGCATCTCACTGGAGTCGAGTCAGAAGATCCTACGGGGGCTCCTGATGCACACAGTGAGCAGCTCAGAGAGCATCAACAAAACAGTGCAGCACATCATAGAGAAAATGGAAGATAGCAATCTTCATAATGACAGATCTGTTAACCTGTTCCTCTGTCTGACTGAAGTGAAAGACCAGCATTTATCCAGAAAGATTCAGGAGTTcctaaaatcagagaaacgctCAGAATATAAACTCTCTGCTGCAGAGTGTTCAGCTCTGTGCTACATGCTGCAGATCTCAGAGGAGGTGCTGGATGAATTAGACCTGAAGAAATACAGCACATCAGAGAGCTCCTATATGAAACTTTTTCCAGCTGTGAACAACTGCCGAAAGGCTCTACTAGCTCACTGTAATCTCACCGTGAAGCACTGGGAAAGTATCTGCTCTGTTCTGAAATCAGAAAACTACTCCCTGatagagctggacctcagtaaaaatgacctgcaggattcaggagaggagctgctctctgctggactgaagagttcacactgtaaactgcagatacTCAGacTGGCTTTCTGTGATGTTGGTGCAAAGACATGTGAAGCTCTGGGCTGTgttttaaacctggaaaactcctACCTAAAAGaactggacctcagtaacaatggcctgcaggattcaggagtggagctgctctttGCTGGATTAAAgggttcacactgtaaacttaAGATTCTCAGGTCAATTCATACAGataattcattattaaatattaaacagtacaattgaggtcttaaaactataaaattaagaaataacaTTAAACAGGTCCCACACACAGCTAATGCTATGAGTAATTACACtctaagacatttttacatcaaTATCTGAAATATGTAGCTATAATATACCATAATACAATTTACCAGCCCTAAAGTtcataaaaagtttaaataattattaccaGAATTTTGACATGTGCAAAAGTTTACTTAGAGAATTACAAGTGCATCagtccaaataaaattaaatatatgatGTTCTTTATTACTTTAGTACAgattaataaagattaatatgATTTGCTATGTTACTTAACAGTCTAAAATTGCAGACTAGTCATAATGACTAATGGTAAAATGGTGATGCTAACTGTTCTCTGTTAATAACTGATGTTTGATAAGAGATGGTTTgattcagaggtggaaaaagtactgaaaatatgtaattaattaaaagtaaagttacttaaagtacctttac
>XM_022665899.1
TCCAAAGTCATACACGGGGAGGCAAAAAACAGAGGTAATCCAAATAATCAGAAACGGTAACAGTCCAAGTAATACACGGATCCAAAAAGCAGAGAGAAGGCAAAAGTCGAGGTATAACAGTCCAGAGAGTCAAAACCAGAAGATTAAAAAATAGGAATTATAGGAATTCGCTTTGTAATGAGGGCTAACCAATCAATTACTCGGCACAGAGTGTAAGTGAAGGGGGTTTTTATGGTGTGGGTAATCAATATTCAGGGCTTCCGGGTGGTGGCAGGTGAACAGGTGAGTGCATGATGTCAGAGTATGGTGTGTTCTGGGAAGTGTAGTTGGGAGACTGGAGATCGTCAGCAGCGCTGaatgtgggagagacaggagtgctttcagcaccagacctGACAGTAGgtaaccatgaattctgctccCTATCAAGGTATGAGGTTTAGGAGTCAAACCCTTTTTCACACAGagttagattggtttggatagattttttctctgtttatgaTGATTCAGCCATTTTCTTATCTATTTACAAAgcgtttttattttatctgctttacagaatgcagaaatccacagcagAACCTCCAgagcccagctgtgtgtctatgaagagtaaCAGGTCAATATTTGAACCTCCTACCTTCAGTAATAAAGGAGAAcctccagaacccagctgtgtgtctataaAGAGTAACCACTCAATGATTCAACCTCCTACCTTCAGTAATAAAGGAGAAcctccagaacccagctgtgtgtctatgaagagtaaCCACTCAATGATTCAACCTCCTACCTTCAGTAATAAAGGAGAAcctccagaacccagctgtgtgtctatgaagagtaaCAGGTCGATGCCTGAACCTCCTGCCTTCAGTAATAAAGGAGAACCTCCAgagcccagctgtgtgtctatgaagagtaaCAGGTCGATGCCTGAACCTCCTTCCTTCAGTAATAAAGGAGAACCTCCAGAGCCCAGGGGGAGGAGTGGTCTGGTCCAGGATCAGTgcaggtgtggagtgtgtgagcaGCTTCTGACAGATCCAGTCTCGATCACCTGTGGACACAGTTTCTGCAGACAGTGTATCAGCAGCTTCAGGAACAAAACTGCTCTGTTAGGAGACTTTATCTGTCCCTGCTGCAGAAAGAACTCTAGAACACGTCCTGCTCTACATCCACACATAGAGGAGTCTAGAAAGCAGGATTCCTACCAACCAGTGGATGATGTTCTGCAGAGAGTCTTTCAGAAACACAAAACCAGCATGAAGAACAGGTACGAAAGCTTATTTGAGGGAATCAAAACACCAGAGAATAGAACCCTCCTGAACAGGATTTACACTCAGCTCTACAtcatagagggagagagtgaaggagtTAATAAAGAACATGAGATTCTAAAGATGGAGAAACAATCCAGCAGATACTTACAGGACACTCCAATCAACTGCTCAGATATTTTTAGGCCTGAAGAAAATCCTGATCGAGAAACTGAAGATGAGCACATTAGAGCTGCAATGCTTAGTGGTCTTGGagaaatcaaaataaaagaaGACAAAGGACCAAAGAAGATCCGAACTGTCCTGACTAAAGGAATTGCTGGAATTGGGAAAACTgtctctgtgcagaagttcattctTGACTGGGCTGAAGGAAAAGCCAACCAGGATGTGGATTTCATGTTTGTGCTTCCGTTCCGAGAACTGAACCTGATTAAAGATGATCAGTACAGTCTTCATAGACTTCTGTGTGCCTTCCACCCTGATCTCAAAGATCTGGACCCTAAGATCTACAATACATGCAGAATTGTGTTCATCTTTGATGGACTGGATGAAAGCAGAATTCCACTGTACTTTGAGAGGTGTAAGAAAGTATCTGATGTAACCATGACATCATCAGTTGGTGTGTTGATATCAAACCTTCTTGAAGGCGAGCTGCTGCCCTCTGCTCACATCTGGATTACCTCCCGGCccgcagcagccaatcagattcctcCTCGGTACATCAGCCGTGTGACAGAAATTCAGGGATTTAATGAGCCACAGAAGGAGGAGTACTTTAGGAAGAGGATCAGTGACCAAGACCAAGCCCAGAAAATCATCTCCCACATTAAGACAGCGAGGAGCCTCCACATCATGTGCCACATTCCcgtcttctgctggatctcagCCACTGTGCTTCAGCAAATCCTGAGACAGAGTGATACAGAAATCCCTAAAACTCTGACTGAAATGTACTCCCACTTCCTGATCACTCAGACCAGCATGAAGAATGAGAAGTATGAGGGAAGCTATGATAGGGATACAGAAGAATTGCTGGAATCCAACAGAACTGTGCTCCTGAAACTGGCTAAACTGGCTTTCTATCAGCTGATGAAGGGGAATGTGATGTTCTATGAAGAGGACCTGAGAGAGAGCGGTATTGATCTCACAGAGGCCTCAGTGTATTCTGGGATTTGCACTGAGATCTTCAGGGAAGAATGTGTGCTTTATCAGAGGAAGGTCTACAGCTTTGTTCATCTGAGCTTTCAGGAGTTCCTGGCTGCTCTGTATGTGTTTCACTGCTACATGATCAAGAACATGGAGGTACTGGAAGTTTTTGAAAAATGGATCAGTATGTTTGAAAATGTTTCACTGGATAAACTCCTGTGTGGAGCAGTGGATGAAGCCTTAAAGAGTCAGAATGGACACCTGGATCTTTTCCTCCGTTTCCTGCTGGGCATCTCACTGGAGTCGAGTCAGAAGATCCTACGGGGGCTCCTGATGCACACAGTGAGCAGCTCAGAGAGCATCAACAAAACAGTGCAGCACATCATAGAGAAAATGGAAGATAGCAATCTTCATAATGACAGATCTGTTAACCTGTTCCTCTGTCTGACTGAAGTGAAAGACCAGCATTTATCCAGAAAGATTCAGGAGTTcctaaaatcagagaaacgctCAGAATATAAACTCTCTGCTGCAGAGTGTTCAGCTCTGTGCTACATGCTGCAGATCTCAGAGGAGGTGCTGGATGAATTAGACCTGAAGAAATACAGCACATCAGAGAGCTCCTATATGAAACTTTTTCCAGCTGTGAACAACTGCCGAAAGGCTCTGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022665898.1 True 3974 mRNA 0.42 4 152798 163938
XM_022665899.1 False 3107 mRNA 0.45 2 160392 163938

Neighbor

gene id symbol gene type direction distance location
tbc1d10b tbc1d10b coding downstream 19205 104745 ~ 133593 (-)
LOC103044774 LOC103044774,LOC108438020 coding downstream 51769 92506 ~ 101029 (-)
LOC103045793 mylpf,LOC103045793 coding downstream 76046 69819 ~ 76752 (-)
cd2bp2 cd2bp2 coding downstream 87235 57616 ~ 65563 (-)
LOC111191303 NA coding downstream 99485 36305 ~ 53313 (-)
abcc1 abcc1,LOC107654509 coding upstream 112691 276629 ~ 319839 (-)
nde1 nde1,LOC107654507,LOC107688124,LOC107601288 coding upstream 228260 392198 ~ 417382 (-)
pirt pirt,LOC103042629 coding upstream 260388 424326 ~ 427020 (-)
LOC103041204 gspt1l,LOC108438004,LOC107721494,LOC100304847,LOC107654506,LOC107590378 coding upstream 268219 432157 ~ 448660 (-)
pdxdc1 pdxdc1,LOC107601286 coding upstream 288656 452594 ~ 484902 (-)
G306934 NA non-coding downstream 34978 117064 ~ 117820 (-)
G306834 NA non-coding downstream 70681 32740 ~ 82117 (-)
G306943 NA non-coding upstream 40115 204053 ~ 204448 (-)
G306951 NA non-coding upstream 63595 227533 ~ 232773 (-)
G306968 NA non-coding upstream 122960 286898 ~ 287535 (-)
G306995 NA non-coding upstream 259005 422943 ~ 424133 (-)
G307001 NA non-coding upstream 330600 494538 ~ 508941 (-)
LOC111191304 NA other downstream 1547 83699 ~ 151251 (-)
smim22 smim22,si:ch1073-443f11.2,LOC107688153 other upstream 607182 771120 ~ 776215 (-)

Expression


Co-expression Network