G84410


Basic Information

Item Value
gene id G84410
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 10807309 ~ 10807963 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU96058
CTGAACTTTGCCAATACTAATCTTATATACAGGCATTTGACTAAAAATACATTCAGTCGTCGCTCCCAAAATGAATTCAACGGGTCATCTTGTTAATGTTCTAAATGAATTATGTCTCTGATTGTCATTACCGATTAAAGAGTATCTGGCGCCACCGCACGGTTAAAATAAACACATTTGCCAAGTACATTGGTATTAAAAACGGCTTTTAAAAACTGTTCATGATTCAGTTTTGGGGACCGTGACAGAAGTTTGATGCTGTCGTGGAACAAGCAACAGCCGGCATTTTCCTCCTCCCGACTCGAGTGCCTCATCTTCTTAATCTCCTCACGTAAATGATTACATTTCGATGACTTGCGTTTCTTCCCCTCCGCAGAAACCACCACAGGTTCATCAATGCCGTCAAAATTATTCATTTTTCTGTTTTTGTTGATCACAAAGCACAAAGTAGATAAGGAAAACTAGGATGTATTCAGAGCGCCGCCATTACTGTTTACAGTGTGTGGAATGGTGCGCTGTGATTGGTTGAGCGGATATATCGCATTCTGCAGAGAAGGGAGAGTGGCGTTTGTCGCGGTTTGGAAAGAAAGGGAGAAAACATGACAGAATAACACGACGGATATCGCATTTTGTGCAAAATTAATAAATGACTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96058 True 655 lncRNA 0.41 1 10807309 10807963

Neighbor

gene id symbol gene type direction distance location
CI01000013_10756927_10790192 FRMD4A coding upstream 16820 10756927 ~ 10792761 (+)
CI01000013_10586449_10594082 NA coding upstream 212867 10585818 ~ 10594442 (+)
CI01000013_10502138_10525511 GRM3 coding upstream 281635 10500690 ~ 10525674 (+)
CI01000013_10335904_10336688 NA coding upstream 470413 10335904 ~ 10336896 (+)
CI01000013_10261599_10283287 NA coding upstream 523342 10260271 ~ 10283967 (+)
CI01000013_10808688_10819703 NA coding downstream 725 10808688 ~ 10819925 (+)
CI01000013_10821530_10827412 SEPHS1, SEPHS1.L coding downstream 13567 10821530 ~ 10827977 (+)
CI01000013_10865753_10884937 MAPK8IP2 coding downstream 57790 10865753 ~ 10886301 (+)
CI01000013_10916049_11031034 NA coding downstream 105732 10913695 ~ 11031159 (+)
CI01000013_11063977_11172626 NA coding downstream 256014 11063977 ~ 11172634 (+)
G84386 NA non-coding upstream 149732 10644446 ~ 10657577 (+)
G84390 NA non-coding upstream 163504 10633395 ~ 10643805 (+)
G84405 NA non-coding upstream 192932 10614151 ~ 10614377 (+)
G84404 NA non-coding upstream 194894 10612194 ~ 10612415 (+)
G84383 NA non-coding downstream 33753 10841716 ~ 10850104 (+)
G84444 NA non-coding downstream 97222 10905185 ~ 10905428 (+)
G84445 NA non-coding downstream 103210 10911173 ~ 10911440 (+)
G84464 NA non-coding downstream 203372 11011335 ~ 11011541 (+)
G84466 NA non-coding downstream 207431 11015394 ~ 11015705 (+)
G84250 NA other upstream 591347 10215127 ~ 10215962 (+)
G84215 NA other upstream 727973 10076454 ~ 10079336 (+)
G84194 NA other upstream 770516 10030608 ~ 10036953 (+)
G84005 NA other upstream 1205074 9601611 ~ 9602235 (+)
G84768 NA other downstream 1362026 12169989 ~ 12170818 (+)
G84790 NA other downstream 1376979 12184942 ~ 12201975 (+)
G84864 NA other downstream 1557086 12365049 ~ 12375905 (+)

Expression


Co-expression Network