G84444


Basic Information

Item Value
gene id G84444
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 10905185 ~ 10905428 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU96099
GATTTTTAACTCCAACCGTTGCGGTCTGTCAGTCGTATAATGCTTGTCAATGGTAACTCCATCTATAAGAGTCAAAAAAACATGCACAGACAAATCCAAATTAAACCCTGCGGCTCGTGACGACACATTGATGTCATAAGACACGAAATGATCAGTTTGTGCGAGAAACCGAACAGTATTTATATCATTTTTCACCTCTAGAACACCACTATGTCCAACTGCCTTGCGCATCCGGTTGGTGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96099 True 244 lncRNA 0.42 1 10905185 10905428

Neighbor

gene id symbol gene type direction distance location
CI01000013_10865753_10884937 MAPK8IP2 coding upstream 18884 10865753 ~ 10886301 (+)
CI01000013_10821530_10827412 SEPHS1, SEPHS1.L coding upstream 77208 10821530 ~ 10827977 (+)
CI01000013_10808688_10819703 NA coding upstream 85260 10808688 ~ 10819925 (+)
CI01000013_10756927_10790192 FRMD4A coding upstream 114696 10756927 ~ 10792761 (+)
CI01000013_10586449_10594082 NA coding upstream 310743 10585818 ~ 10594442 (+)
CI01000013_10916049_11031034 NA coding downstream 8267 10913695 ~ 11031159 (+)
CI01000013_11063977_11172626 NA coding downstream 158549 11063977 ~ 11172634 (+)
CI01000013_11224779_11252341 SHANK3A, SHANK3 coding downstream 319270 11224698 ~ 11253004 (+)
CI01000013_11271292_11274155 NA coding downstream 365178 11270606 ~ 11274754 (+)
CI01000013_11287928_11292308 NA coding downstream 382500 11287928 ~ 11293107 (+)
G84383 NA non-coding upstream 55081 10841716 ~ 10850104 (+)
G84410 NA non-coding upstream 97222 10807309 ~ 10807963 (+)
G84386 NA non-coding upstream 247608 10644446 ~ 10657577 (+)
G84390 NA non-coding upstream 261380 10633395 ~ 10643805 (+)
G84445 NA non-coding downstream 5745 10911173 ~ 10911440 (+)
G84464 NA non-coding downstream 105907 11011335 ~ 11011541 (+)
G84466 NA non-coding downstream 109966 11015394 ~ 11015705 (+)
G84470 NA non-coding downstream 119187 11024615 ~ 11024816 (+)
G84473 NA non-coding downstream 140947 11046375 ~ 11046640 (+)
G84250 NA other upstream 689223 10215127 ~ 10215962 (+)
G84215 NA other upstream 825849 10076454 ~ 10079336 (+)
G84194 NA other upstream 868392 10030608 ~ 10036953 (+)
G84005 NA other upstream 1302950 9601611 ~ 9602235 (+)
G84768 NA other downstream 1264561 12169989 ~ 12170818 (+)
G84790 NA other downstream 1279514 12184942 ~ 12201975 (+)
G84864 NA other downstream 1459621 12365049 ~ 12375905 (+)

Expression


Co-expression Network