G84445


Basic Information

Item Value
gene id G84445
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 10911173 ~ 10911440 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU96100
GTCCTATGTTCGTAATAAAAAATCTGTTTAAATGACCGATGTATTATCTTGTCCTTTTAACAGTTAAGGGGTTTTCCCGTGACTGACAGCGCTAGTCAAAACATTTGTCAGTTGCGTCTTGTTCCGTGTTCACAACAGTTCAGTCTTTTCAATGTAAAAGTCTTCGCTACTGACTGACACACTCATAAAGACAGTCTTTGCCGCCATCTAATGGCGTAATAATGTAACTTCTGTTGCCGTTCACAGTCAGGGACTATTTTTTCCGGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96100 True 268 lncRNA 0.41 1 10911173 10911440

Neighbor

gene id symbol gene type direction distance location
CI01000013_10865753_10884937 MAPK8IP2 coding upstream 24872 10865753 ~ 10886301 (+)
CI01000013_10821530_10827412 SEPHS1, SEPHS1.L coding upstream 83196 10821530 ~ 10827977 (+)
CI01000013_10808688_10819703 NA coding upstream 91248 10808688 ~ 10819925 (+)
CI01000013_10756927_10790192 FRMD4A coding upstream 120684 10756927 ~ 10792761 (+)
CI01000013_10586449_10594082 NA coding upstream 316731 10585818 ~ 10594442 (+)
CI01000013_10916049_11031034 NA coding downstream 2255 10913695 ~ 11031159 (+)
CI01000013_11063977_11172626 NA coding downstream 152537 11063977 ~ 11172634 (+)
CI01000013_11224779_11252341 SHANK3A, SHANK3 coding downstream 313258 11224698 ~ 11253004 (+)
CI01000013_11271292_11274155 NA coding downstream 359166 11270606 ~ 11274754 (+)
CI01000013_11287928_11292308 NA coding downstream 376488 11287928 ~ 11293107 (+)
G84444 NA non-coding upstream 5745 10905185 ~ 10905428 (+)
G84383 NA non-coding upstream 61069 10841716 ~ 10850104 (+)
G84410 NA non-coding upstream 103210 10807309 ~ 10807963 (+)
G84386 NA non-coding upstream 253596 10644446 ~ 10657577 (+)
G84464 NA non-coding downstream 99895 11011335 ~ 11011541 (+)
G84466 NA non-coding downstream 103954 11015394 ~ 11015705 (+)
G84470 NA non-coding downstream 113175 11024615 ~ 11024816 (+)
G84473 NA non-coding downstream 134935 11046375 ~ 11046640 (+)
G84437 NA non-coding downstream 216138 11127578 ~ 11128950 (+)
G84250 NA other upstream 695211 10215127 ~ 10215962 (+)
G84215 NA other upstream 831837 10076454 ~ 10079336 (+)
G84194 NA other upstream 874380 10030608 ~ 10036953 (+)
G84005 NA other upstream 1308938 9601611 ~ 9602235 (+)
G84768 NA other downstream 1258549 12169989 ~ 12170818 (+)
G84790 NA other downstream 1273502 12184942 ~ 12201975 (+)
G84864 NA other downstream 1453609 12365049 ~ 12375905 (+)

Expression


Co-expression Network