Gene
RNA
| Item | Value |
|---|---|
| gene id | G84464 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000013 |
| NCBI id | null |
| chromosome length | 12551977 |
| location | 11011335 ~ 11011541 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU96119 | True | 207 | lncRNA | 0.41 | 1 | 11011335 | 11011541 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000013_10865753_10884937 | MAPK8IP2 | coding | upstream | 125034 | 10865753 ~ 10886301 (+) |
| CI01000013_10821530_10827412 | SEPHS1, SEPHS1.L | coding | upstream | 183358 | 10821530 ~ 10827977 (+) |
| CI01000013_10808688_10819703 | NA | coding | upstream | 191410 | 10808688 ~ 10819925 (+) |
| CI01000013_10756927_10790192 | FRMD4A | coding | upstream | 220846 | 10756927 ~ 10792761 (+) |
| CI01000013_10586449_10594082 | NA | coding | upstream | 416893 | 10585818 ~ 10594442 (+) |
| CI01000013_11063977_11172626 | NA | coding | downstream | 52436 | 11063977 ~ 11172634 (+) |
| CI01000013_11224779_11252341 | SHANK3A, SHANK3 | coding | downstream | 213157 | 11224698 ~ 11253004 (+) |
| CI01000013_11271292_11274155 | NA | coding | downstream | 259065 | 11270606 ~ 11274754 (+) |
| CI01000013_11287928_11292308 | NA | coding | downstream | 276387 | 11287928 ~ 11293107 (+) |
| CI01000013_11326503_11335221 | NA | coding | downstream | 314962 | 11326503 ~ 11335514 (+) |
| G84445 | NA | non-coding | upstream | 99895 | 10911173 ~ 10911440 (+) |
| G84444 | NA | non-coding | upstream | 105907 | 10905185 ~ 10905428 (+) |
| G84383 | NA | non-coding | upstream | 161231 | 10841716 ~ 10850104 (+) |
| G84410 | NA | non-coding | upstream | 203372 | 10807309 ~ 10807963 (+) |
| G84466 | NA | non-coding | downstream | 3853 | 11015394 ~ 11015705 (+) |
| G84470 | NA | non-coding | downstream | 13074 | 11024615 ~ 11024816 (+) |
| G84473 | NA | non-coding | downstream | 34834 | 11046375 ~ 11046640 (+) |
| G84437 | NA | non-coding | downstream | 116037 | 11127578 ~ 11128950 (+) |
| G84486 | NA | non-coding | downstream | 126352 | 11137893 ~ 11138221 (+) |
| G84250 | NA | other | upstream | 795373 | 10215127 ~ 10215962 (+) |
| G84215 | NA | other | upstream | 931999 | 10076454 ~ 10079336 (+) |
| G84194 | NA | other | upstream | 974542 | 10030608 ~ 10036953 (+) |
| G84005 | NA | other | upstream | 1409100 | 9601611 ~ 9602235 (+) |
| G84768 | NA | other | downstream | 1158448 | 12169989 ~ 12170818 (+) |
| G84790 | NA | other | downstream | 1173401 | 12184942 ~ 12201975 (+) |
| G84864 | NA | other | downstream | 1353508 | 12365049 ~ 12375905 (+) |
