G311947


Basic Information

Item Value
gene id G311947
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172862.1
NCBI id APWO02000125.1
chromosome length 627872
location 179491 ~ 185152 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU429304
ATatttgtcatgtctggtgctgaaagcacgtctgtgtctcccacatccagctctatctgcgattctcacagtaacaactacaatacccagaacgcaccattccatgacacaacacacactcccgatcacatgacacgtcacatgacgccaccaggaagtcccgagtactgattactcagtgtatttaaggaccatgctcacgctcacacctcgccgagtatctgtttggtatatcctacaatacaaagcgtttctcttgcccttgctattctccgtgtatgatcttgtttttgttttctaccgactttgatttttgcctgctcccttgtgttggattaccgtgtatgacctggactgtttattgtactctggatttttgcctaccctgtgatactgcctatccgtgtatgaactctggactgtcctccggttatggtatggtttctctacactgtgcatttttggtactgaccctgtttctgttgactacccctgtctactctataactttaataaaagttattttattgtatctgcaccagtctcattcctgtctggccctgacaatatta
>TU429305
ATatttgtcatgtctggtgctgaaagcacgtctgtgtctcccacatccagctctatctgcgattctcacagtaacaactacaatacccagaacgcaccattccatgacacaacacacactcccgatcacatgacacgtcacatgacgccaccaggaagtcccgagtactgattactcagtgtatttaaggaccatgctcacgctcacacctcgccgagtatctgtttggtatatcctacaatacaaagcgtttctcttgcccttgctattctccgtgtatgatcttgtttttgttttctaccgactttgatttttgcctgctcccttgtgttggattaccgtgtatgacctggactgtttattgtactctggatttttgcctaccctgtgatactgcctatccgtgtatgaactctggactgtcctccggttatggtatggtttctctacactgtgcatttttggtactgaccctgtttctgttgactacccctgtctactctataactttaataaaagttattttattgtatctgcaccagtctcattcctgtctggccctgacaatatta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU429304 True 572 lncRNA 0.44 2 179491 185152
TU429305 False 572 lncRNA 0.44 2 179491 185152

Neighbor

gene id symbol gene type direction distance location
LOC103046328 nme2a,LOC108430208,LOC106589447,LOC100135963,LOC100136353 coding downstream 30691 134421 ~ 148800 (-)
LOC111191400 NA coding downstream 159686 18066 ~ 19805 (-)
LOC107197026 NA coding upstream 439282 624434 ~ 624795 (-)
G311932 NA non-coding downstream 23537 126384 ~ 155954 (-)
G311930 NA non-coding downstream 71669 106736 ~ 107822 (-)
G311924 NA non-coding downstream 125143 52589 ~ 54348 (-)
G311835 NA non-coding downstream 162090 16102 ~ 17401 (-)
G311953 NA non-coding upstream 58491 243643 ~ 317971 (-)
G311988 NA non-coding upstream 419890 605042 ~ 605292 (-)

Expression


Co-expression Network