G311953


Basic Information

Item Value
gene id G311953
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172862.1
NCBI id APWO02000125.1
chromosome length 627872
location 243643 ~ 317971 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU429312
aatgaaactgaaacacctggttttagagcacaataattgattgtggtgatggacagttctggtggaaacaggagagttgaggtgcacattgaattctgcgtgatttgatcagccgtggttttatgttttttggatacaatccgggttagcacccgaacatccctttcagacagcttcctcttacagcgtccacagttaatcctgttggatgtggttggttcttcttggtggtatgctgatgttaccctggataccgtggctcttgatgcatcacaaagacttgctgtcttggtcacagatgctccagcaagacgtgcaccaacaatttgtcctcttttgaactctggtatgtctcccataatgttatagtgtgcattgtaatatttagagcagaactgtgctcttaccctgctaatagaaccttcacactctgctcttactggtgcaatgtgcaattaatgaagattgaacaccaggctgctccaatttagacatgaaacctaaaatcacacactaaaatgatgacaggtgtttcagtttcattgtccaacccct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU429312 True 555 lncRNA 0.43 2 243643 317971

Neighbor

gene id symbol gene type direction distance location
LOC103046328 nme2a,LOC108430208,LOC106589447,LOC100135963,LOC100136353 coding downstream 94843 134421 ~ 148800 (-)
LOC111191400 NA coding downstream 223838 18066 ~ 19805 (-)
LOC107197026 NA coding upstream 306463 624434 ~ 624795 (-)
G311947 NA non-coding downstream 58491 179491 ~ 185152 (-)
G311932 NA non-coding downstream 87689 126384 ~ 155954 (-)
G311930 NA non-coding downstream 135821 106736 ~ 107822 (-)
G311924 NA non-coding downstream 189295 52589 ~ 54348 (-)
G311835 NA non-coding downstream 226242 16102 ~ 17401 (-)
G311988 NA non-coding upstream 287071 605042 ~ 605292 (-)

Expression


Co-expression Network