LOC111191400


Basic Information

Item Value
gene id LOC111191400
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172862.1
NCBI id APWO02000125.1
chromosome length 627872
location 18066 ~ 19805 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022666292.1
GGTCCACCATACGGCGTCTCAGGGGGGGGAAGCAGTATCCCACAAACACTATTTATAGTGGGTGTGGTGTGCTGTTGACCTCAACTCGGGACGTTGTGGGCCGGTGGGCAGAGTACTTCGAAGACCTCCTCAATCCCACCAGCACGCCTTCCATTGAGGAAGCAGAGCCAGGGGACCTTGGGGTGGACTCTCCAATTTCGGATGCTGAGGTCACCGAGGTGGTTAAAAAGCTCCTCGGTGGTAAGGCACCGGGGGTGGATGAGATCCGCCCGGAGTTCCTTAAGGCTCTGGATGTTGTAGGGTTGTGTTGGTTAACGTGACTCTGCAACATTGCGTGGACATCGGGGGCAGTTCCTGTGGATTGGCAGACCGGGGTGGTTGTCCCCTTATTCAAAAAGGGGGACAGGAGAGTGTGTTCCAATTACAGGGGAATCACACTCTTAAGCCTCCCTGGTAAGGTCTATTCGGGGGTCCTGGAGAGGAGGGTTCGTCGGATAGTCGAACCTCGGATACAGGAGGAGCAGTGTGGTTTTCGTCCTGGCCGTGGAACACTGGATCAGCTCTATACCCTCAGCAGGGTCTTGGAGGGATCATGGGAGTTCGCCCAACCAGTCTACATGTGTTTTGTGGACTTGGAGAAGGCGTTCGATCGTGTCCCTCGGGGAGTCTTGTGGGGGGGTACTCCGGGAGTATGGGGTACCGGGCCCTTTGATACGGGCTGTCAGGTCCCTGTATGACCGGTGTCAGAGCTTGGTCCGCATTGCCGGCAGTAAGTCGGACTCGTTTCCAGTGAGGGTTGGACTCCGCCAAGGTTGCCCTCTGTCACCGATTCTGTTCATAACTTTTATGGATAGAATTTCTAGGCGCAGCCAAGGTGTTGAGGGGATCCGTTTTGGTGGCCTTGGGATAGCATCTCTGCTTTTTGCAGATGATGTGGTCTTATTGGCTTCATCAGCTCGTGATCTACAACTCGCACTGGAGCAGTTCGCAGCTGAGTGTGAAATGGCCGGGATGAGAATCAGCGCCTCCAAGTCCGAGGCCATGGTCCTGAGCCGGAAAAGGGTAGAATGCCTTCTCCGGGTTGGGGAGGAGGTCCTGCCTCAAGTGGAGGAGTTTAAGTATCTTGGGGTCTTGTTCACGAATGAGGGAAAGATGGAGCGGGAGATCGACAGACGGATCGGTGCTGCGTCAGCAGTCATGCGGGCGCTGTACGGGTCCGTCGTGGTGAAGAGAGAGCTGAGCCAAAAAGCAAAGCTCTCGGTTTACCAGTCGATCTACGTTCCTACCCTCATCTATGGTCATGAGCTTTGGGTCATGACCGAAAGAACGAGATCACGGATACAAGCGGCCGAAATGAGTTTCCTCCGCAGGGTGTCTGGGCTCTCCCTTAGAGATAGGGTGAGGAGCTCAGTCATCCGGGAGGGACTCAGAGTAGAGCCGCTGCTTCTCCACATCGAGAGGAGCCAGTTGAGGTGGCTTGGGCATCTGATTAGGATGCCTCCTGGACGCCTCCCTGGTGAGGTGTTTCAGGCACGTCCCACCGGGAGGAGGCCCAGGGGAAGACCCAGGACACGCTGGAGGGACTATGTCTCTCGGTTGGCCTGGGAACGCCTTGGAATTCCCCCGGACGAGCTGGCCCAAGTGGCTGGGGAGAGGGAAGTCTGGGTTTCCCTGCTTAGGCTGCTGCCCCCGCGACCCGACCCTGGATAAGCggaggaaaatggatggatggatggatgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022666292.1 True 1740 mRNA 0.57 1 18066 19805

Neighbor

gene id symbol gene type direction distance location
LOC103046328 nme2a,LOC108430208,LOC106589447,LOC100135963,LOC100136353 coding upstream 114616 134421 ~ 148800 (-)
LOC107197026 NA coding upstream 604629 624434 ~ 624795 (-)
G311835 NA non-coding downstream 665 16102 ~ 17401 (-)
G311924 NA non-coding upstream 32784 52589 ~ 54348 (-)
G311930 NA non-coding upstream 86931 106736 ~ 107822 (-)
G311932 NA non-coding upstream 106579 126384 ~ 155954 (-)
G311947 NA non-coding upstream 159686 179491 ~ 185152 (-)
G311953 NA non-coding upstream 223838 243643 ~ 317971 (-)

Expression


Co-expression Network