G84879


Basic Information

Item Value
gene id G84879
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 12419903 ~ 12420119 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU96616
AGAAGCTGTAGTGGAAGGAGCTGAGGCACGGTTGAGCCACAAAGTGTTGGTAGTTGGCAAGGGAAGAGCTGTTCTTGGAAGTGAATCATTGAATCATTCATTCAAATGATTTATTCAAACACACTGATTCATACACTGCTGTGGGACTGCTCAGAGATGCACAATGGCCGATTCTGCTTTGACAATTTATAAGTTTTTCCATTGGTGGAGCAAAAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96616 True 217 lncRNA 0.42 1 12419903 12420119

Neighbor

gene id symbol gene type direction distance location
CI01000013_12379804_12398839 NA coding upstream 21064 12379521 ~ 12398839 (+)
CI01000013_12314589_12315317 RGS9BP coding upstream 104394 12313175 ~ 12315509 (+)
CI01000013_12272623_12275499 NIP7, NIP7.L coding upstream 144182 12272623 ~ 12275721 (+)
CI01000013_12260938_12264631 NA coding upstream 155272 12260938 ~ 12264631 (+)
CI01000013_12099659_12100829 GCSHA, GCSH coding upstream 318627 12097363 ~ 12101276 (+)
CI01000013_12459982_12465113 PDCD10, PDC10, PDCD10B, PDCD10A, PDCD10.S coding downstream 39863 12459982 ~ 12465573 (+)
CI01000013_12536762_12549569 NA coding downstream 116643 12536762 ~ 12550015 (+)
G84867 NA non-coding upstream 42656 12376889 ~ 12377247 (+)
G84820 NA non-coding upstream 186119 12233246 ~ 12233784 (+)
G84775 NA non-coding upstream 281793 12137191 ~ 12138110 (+)
G84769 NA non-coding upstream 288369 12127831 ~ 12131534 (+)
G84741 NA non-coding upstream 324444 12047870 ~ 12095459 (+)
G84898 NA non-coding downstream 56532 12476651 ~ 12476877 (+)
G84899 NA non-coding downstream 58134 12478253 ~ 12478528 (+)
G84919 NA non-coding downstream 102755 12522874 ~ 12524980 (+)
G84864 NA other upstream 43998 12365049 ~ 12375905 (+)
G84790 NA other upstream 217928 12184942 ~ 12201975 (+)
G84768 NA other upstream 249085 12169989 ~ 12170818 (+)
CI01000013_10756927_10790192 FRMD4A other upstream 1635146 10756927 ~ 10792761 (+)
G84250 NA other upstream 2203941 10215127 ~ 10215962 (+)

Expression


Co-expression Network