G323792


Basic Information

Item Value
gene id G323792
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172899.1
NCBI id APWO02000093.1
chromosome length 238395
location 156504 ~ 210818 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU445866
acatcagctcacagacgccctgtgctgcagacatcaccttaggagtgatgtggggagagagcgccatctacccacccagagggagtagggccaattttgctccctctgacgccggcatccatcttcctcttgattatattccagagtttttgaatttggtaaaatcaaataaatattttttgagtattttcttcttttatttctcgAGCTGTATATGTAAGTGATTACTATATTAGTAAAATTATTAGTAAAAGGAAAACTAAACAATTTAAAGGAGGTTCTAGTACCCCGTTGGAgcctctagcctggatacaaggTGAGATATGGTTGGACAGTCAGTTTATGTtatatcactactaggagtgaaCAACTGTCATAGGTGATggctccccagatcatcacaccagcacaTCAATGTCACTCAATTACTCAGTCCAGTAATGTGCCCTTCCCCCCTCAAGTTTTTCAACTGGACAAAATGTCTTTCAATGTGTCGTAGAGGCATGTCTATCAGTGAATGATCTCTACCTaaaagtagcctctgagagcctttttataGGATTGCAGGTTGCAAATCAGTTTTACACCCTCTTGTGGGAAGATCCAGTGTCTAATcggaccacacctgtaatcatttacatatctgccatATCATAATTGCATGTTAAGTTTTGCAGCAAtccagtgtgttttatttttatcaatgAGTGTAAATTTGTCTTATGTTTAAACTGTACACCTGTCacttacactactgtacataatatatttatgatatAAGTTGACATCCTCAGTGCATTCACAAAGTAATCTCTTGTATGTCTCGTTTCTGCTGGCACTGTTATTTTTGTTAACTGTGGTTTAAATGcgaaaacaacaatattaattatagaaataaacagaatattacC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU445866 True 911 lncRNA 0.38 2 156504 210818

Neighbor

gene id symbol gene type direction distance location
LOC111191686 acer2,LOC108431792,LOC105908550 coding upstream 76583 66492 ~ 79921 (+)
LOC103030934 LOC108431796,LOC108260608,LOC107746728,LOC107603013,LOC107551804,LOC107676129,LOC107720316,LOC107692187 coding upstream 115173 34066 ~ 41331 (+)
trnar-ucu_43 NA coding upstream 120691 35722 ~ 35813 (+)
trnar-ucu_42 NA coding upstream 124014 32399 ~ 32490 (+)
LOC103031255 patl1 coding upstream 126990 20870 ~ 29514 (+)
LOC111191687 NA non-coding upstream 92899 56730 ~ 63605 (+)
G323808 NA non-coding downstream 6663 217481 ~ 217719 (+)
G323809 NA non-coding downstream 7373 218191 ~ 218470 (+)
G323812 NA non-coding downstream 8213 219031 ~ 220145 (+)

Expression


Co-expression Network