G323808


Basic Information

Item Value
gene id G323808
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_019172899.1
NCBI id APWO02000093.1
chromosome length 238395
location 217481 ~ 217719 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU445885
acagcgggggtgttgtgccgattctgtccgcgaagcgggagtcagattcagcagagagtcggattcggcacaaacgcggcggcacctcgcggtccgcggtgtcagttgtaagcgctcgcgctagccgcaaaatacggcagaaaacactgagggagctgcagaattatgaatgggactagaatatgagcacgaggagatcaaagagaaccttcacctgtgagtagctctctctctctctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU445885 True 239 lncRNA 0.56 1 217481 217719

Neighbor

gene id symbol gene type direction distance location
LOC103032510 LOC108413971 coding upstream 9595 189455 ~ 207886 (+)
LOC103031985 NA coding upstream 28705 175898 ~ 188776 (+)
LOC111191686 acer2,LOC108431792,LOC105908550 coding upstream 137560 66492 ~ 79921 (+)
LOC103030934 LOC108431796,LOC108260608,LOC107746728,LOC107603013,LOC107551804,LOC107676129,LOC107720316,LOC107692187 coding upstream 176150 34066 ~ 41331 (+)
trnar-ucu_43 NA coding upstream 181668 35722 ~ 35813 (+)
G323792 NA non-coding upstream 6663 156504 ~ 210818 (+)
LOC111191687 NA non-coding upstream 153876 56730 ~ 63605 (+)
G323809 NA non-coding downstream 472 218191 ~ 218470 (+)
G323812 NA non-coding downstream 1312 219031 ~ 220145 (+)

Expression


Co-expression Network