G49146


Basic Information

Item Value
gene id G49146
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 2657196 ~ 3150588 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU66451
gttatagttacagtcagagtaattagttagattacttgttactaggggtgtgacgagacactaatatcatgagactagacgagacacgatactgggttcacgagaacgagacgagacgagatttaaaaataaaattttaaagaaaatgtcaaaaatgaaaaatggcttgaaaatttgtttgacaaaatcatataacgcaaacttaacagactggtttctctcacacattgattctataagaaacagaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66451 True 248 lncRNA 0.33 2 2657196 3150588

Neighbor

gene id symbol gene type direction distance location
LOC103025499 NA coding upstream 40524 2603333 ~ 2616672 (+)
LOC103037045 NA coding upstream 54582 2599242 ~ 2602614 (+)
LOC103035089 NA coding upstream 59560 2584545 ~ 2597636 (+)
LOC103026437 LOC108425081 coding upstream 73877 2527469 ~ 2583319 (+)
LOC103031418 tuba8l,LOC106567204,LOC105022333,LOC106572477,LOC103031418,LOC108265838,LOC108425079,LOC107711852,LOC107679810,LOC107594520 coding upstream 135777 2510144 ~ 2521419 (+)
dmrta2 dmrta2,LOC107578325 coding downstream 21421 3172009 ~ 3175759 (+)
agbl4 agbl4,LOC107603279 coding downstream 369020 3519608 ~ 4194714 (+)
bend5 bend5,LOC106584333,LOC107707580 coding downstream 869865 4020453 ~ 4041702 (+)
bcar3 bcar3 coding downstream 1243113 4393701 ~ 4519665 (+)
pdpn NA coding downstream 1739120 4889708 ~ 4909202 (+)
G49116 NA non-coding upstream 177825 2432799 ~ 2479371 (+)
G49117 NA non-coding upstream 227553 2428120 ~ 2429643 (+)
G49122 NA non-coding upstream 229285 2425130 ~ 2427911 (+)
G49121 NA non-coding upstream 252468 2404515 ~ 2404728 (+)
G49120 NA non-coding upstream 254219 2402683 ~ 2402977 (+)
G49351 NA non-coding downstream 83086 3233674 ~ 3234451 (+)
G49354 NA non-coding downstream 84483 3235071 ~ 3235275 (+)
G49355 NA non-coding downstream 85444 3236032 ~ 3236433 (+)
G49365 NA non-coding downstream 100794 3251382 ~ 3254354 (+)
G49366 NA non-coding downstream 112557 3263145 ~ 3263661 (+)
G48714 NA other upstream 1845931 808155 ~ 811265 (+)
spata6 dnttip2,LOC107700367,LOC107603264,LOC107757995,LOC102796155 other downstream 1049351 4199939 ~ 4239873 (+)
G49475 NA other downstream 1093940 4244528 ~ 4246227 (+)
prok1 prok1,LOC107680267,LOC107711938,LOC107731240 other downstream 2468571 5619159 ~ 5627452 (+)
LOC103023397 NA other downstream 2626464 5777052 ~ 5789265 (+)
G50063 NA other downstream 3220932 6371520 ~ 6376705 (+)

Expression


Co-expression Network