G49151


Basic Information

Item Value
gene id G49151
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 2681198 ~ 2681503 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU66456
acacaagaattttcttttcagtaatagttatatttaagtgtataTTGATTGAAAGTATAAGGATTTTGACCATAGTTCATTCCATGGCTTATTATGCACCAGAAAGTGGTGTGGCACCGTATATAAGTTCTGTTTAAAAGCTAAAAAGTTTCTAAGATGTTTCTCTGGATAttactgtgtttaaatgttattaacattttagatgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU66456 True 206 lncRNA 0.29 2 2681198 2681503

Neighbor

gene id symbol gene type direction distance location
LOC107196890 osbpl9 coding upstream 19742 2616841 ~ 2661456 (+)
LOC103025499 NA coding upstream 64526 2603333 ~ 2616672 (+)
LOC103037045 NA coding upstream 78584 2599242 ~ 2602614 (+)
LOC103035089 NA coding upstream 83562 2584545 ~ 2597636 (+)
LOC103026437 LOC108425081 coding upstream 97879 2527469 ~ 2583319 (+)
tor3a tor3a,LOC108266023,LOC107548256,LOC107699619,LOC107743897,LOC107657890 coding downstream 43982 2725485 ~ 2734540 (+)
LOC103024869 calr,LOC108265943,LOC102308154,LOC106512241,LOC105936842,LOC108425050,LOC103464072 coding downstream 54801 2736304 ~ 2744452 (+)
eps15 eps15 coding downstream 66341 2747844 ~ 2809424 (+)
ttc39a ttc39a,LOC107743871,LOC107599797,LOC107657886,LOC107752432 coding downstream 147432 2828935 ~ 2876428 (+)
rnf11 rnf11,rnf11b coding downstream 200182 2881685 ~ 2917431 (+)
G49150 NA non-coding upstream 8385 2670817 ~ 2672813 (+)
G49116 NA non-coding upstream 201827 2432799 ~ 2479371 (+)
G49117 NA non-coding upstream 251555 2428120 ~ 2429643 (+)
G49122 NA non-coding upstream 253287 2425130 ~ 2427911 (+)
G49121 NA non-coding upstream 276470 2404515 ~ 2404728 (+)
G49154 NA non-coding downstream 25520 2707023 ~ 2709154 (+)
LOC103026017 NA non-coding downstream 27201 2708704 ~ 2724228 (+)
G49163 NA non-coding downstream 158809 2840312 ~ 2840783 (+)
G49164 NA non-coding downstream 185959 2867462 ~ 2869521 (+)
G49162 cdkn2c non-coding downstream 273751 2955254 ~ 2976029 (+)
G48714 NA other upstream 1869933 808155 ~ 811265 (+)
faf1 faf1,LOC107743872 other downstream 301343 2982846 ~ 3152050 (+)
spata6 dnttip2,LOC107700367,LOC107603264,LOC107757995,LOC102796155 other downstream 1518436 4199939 ~ 4239873 (+)
G49475 NA other downstream 1563025 4244528 ~ 4246227 (+)
prok1 prok1,LOC107680267,LOC107711938,LOC107731240 other downstream 2937656 5619159 ~ 5627452 (+)
LOC103023397 NA other downstream 3095549 5777052 ~ 5789265 (+)

Expression


Co-expression Network