G50063


Basic Information

Item Value
gene id G50063
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 6371520 ~ 6376705 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU67633
aCTGAAGTGAGGATGGACGGAAGTGATGACGGATCTGGCAGTGAGCCAGACTCGTTTGGTTGTAGGAGCGGGAATAGGGCCGGTGAGGGAGGAGAATGGCAGGTTGTGCGGTCTAAGAAGAGCAGACGTTTGTCTGAGGATAGAGATTCTAGTGGCAGTGGAGTGCGTGGAGAGACTGTGAAGCGTCGTAAGGAGGAATACCTCATTTTGATCCAGTTTGAATCTGAATCTGCTGGCGTGCTGAATCCGGTCAGGTTGACATCTGAAATTAAATCAGCTCTAGGGGATGTGGCCGGAGCTAAGGTGTTGAGAGGAGGTGGCGGTAATGCACCTTCAGTTGGTCTGCCATCCGCCATAAacctgaaagaagaagaaga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU67633 True 377 TUCP 0.51 2 6371520 6376705

Neighbor

gene id symbol gene type direction distance location
LOC103046076 LOC103046076,LOC108442386 coding upstream 505 6358495 ~ 6371015 (+)
LOC103046376 LOC103046376 coding upstream 17212 6350142 ~ 6354308 (+)
lhfpl5 lhfpl5,lhfpl5b,LOC107591869,LOC107745833 coding upstream 120917 6246229 ~ 6250603 (+)
dclre1b NA coding upstream 444350 5919174 ~ 5927170 (+)
LOC103022582 adora1b,LOC103022582,LOC108414989,LOC107711940,LOC107680252,LOC107591868,LOC107550463,LOC105912002 coding upstream 459180 5891651 ~ 5912340 (+)
LOC103037089 LOC108442388,LOC105023850 coding downstream 16119 6392824 ~ 6400833 (+)
LOC103043236 NA coding downstream 84838 6461543 ~ 6472088 (+)
LOC103041483 slc38a5,slc38a5b,LOC107745748,LOC107678718,LOC107549617,LOC107731265,LOC107668060 coding downstream 169864 6546569 ~ 6587345 (+)
was was coding downstream 213586 6590291 ~ 6601742 (+)
LOC103040567 gpr173,LOC108265110,LOC107549979,LOC107678674,LOC107731146,LOC107549585,LOC105898994 coding downstream 371694 6748399 ~ 6771061 (+)
G50051 mapk14a,LOC106572737,LOC108442382,LOC108265726,LOC105023895,LOC103368176 non-coding upstream 75171 6287836 ~ 6296349 (+)
G50050 NA non-coding upstream 76272 6292421 ~ 6295248 (+)
G50036 srpk1,LOC107591832,LOC107745731 non-coding upstream 90590 6265929 ~ 6280930 (+)
G50025 NA non-coding upstream 119639 6179792 ~ 6251881 (+)
G50012 NA non-coding upstream 216498 6152577 ~ 6155022 (+)
G50071 rpl10a,LOC103141192 non-coding downstream 42079 6418784 ~ 6423352 (+)
G50092 tbc1d25 non-coding downstream 99870 6476575 ~ 6479992 (+)
G50135 NA non-coding downstream 121289 6497994 ~ 6499008 (+)
G50136 NA non-coding downstream 122364 6499069 ~ 6499432 (+)
G50138 nt5dc2,LOC108442396,LOC107745746,LOC107668043,LOC100380632,LOC107678756 non-coding downstream 123444 6500149 ~ 6504331 (+)
LOC103023397 NA other upstream 582255 5777052 ~ 5789265 (+)
prok1 prok1,LOC107680267,LOC107711938,LOC107731240 other upstream 744068 5619159 ~ 5627452 (+)
G49475 NA other upstream 2125293 4244528 ~ 4246227 (+)
spata6 dnttip2,LOC107700367,LOC107603264,LOC107757995,LOC102796155 other upstream 2131647 4199939 ~ 4239873 (+)
faf1 faf1,LOC107743872 other upstream 3219470 2982846 ~ 3152050 (+)
LOC103039117 nol4la,LOC103039117,LOC108412512,LOC108265968,LOC107680239,LOC107550513,LOC107731219,LOC107745834,LOC107549982 other downstream 486651 6863356 ~ 6941978 (+)
trnae-cuc NA other downstream 607485 6984190 ~ 6984261 (+)
c6h9orf3 NA other downstream 1353979 7730684 ~ 7884058 (+)
G50568 NA other downstream 1830637 8207342 ~ 8221162 (+)
G50563 smarcad1,smarcad1a,LOC108437598,LOC107568413,LOC107751429 other downstream 1893543 8270248 ~ 8278756 (+)

Expression


Co-expression Network