G51689


Basic Information

Item Value
gene id G51689
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 12884487 ~ 12886889 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU69726
CCCCTCCAGAGCTGACCTGCAGTAAATATAACTCAGCTGGAGTAAATATAACTCCCGGACGGTGATCAGCACTGACATAGGCTGTCCAATTAAACAGCGCTAAAAGAAGCAGCCAGCAGAGTGGCTGAGATCAGAGCAGCTTTCTGGCTCTGTCCCATCATCCCCCTAAACCTGGAGTCCCCCTACCCTTACAGGCATCCGAGCATCGCCTTTCAGAGCGGGTGAGAGAGTTCATCATGGGATATAAATCCCCAGAGCCTGCGGGAACTTTAAAACCTTTTCAGAATGTGGTTAGTCACGTGTCTTCCGCTCTATAGGGCAGGCCAAGGCCAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU69726 True 334 lncRNA 0.51 2 12884487 12886889

Neighbor

gene id symbol gene type direction distance location
LOC103044019 LOC108439652,LOC108264986,LOC106584369,LOC107585931 coding upstream 7774 12847065 ~ 12876713 (+)
acsbg2 acsbg2,LOC107731199,LOC107676759 coding upstream 239891 12605265 ~ 12644596 (+)
LOC103047368 fcho1,LOC108442339,LOC107548880,LOC107717548,LOC107676711 coding upstream 345758 12451420 ~ 12538729 (+)
LOC103041348 foxe3,foxe1,LOC103041348,LOC103130754 coding upstream 762814 12118913 ~ 12121673 (+)
LOC103041649 slc35a3,LOC108439387,LOC107717552,LOC107585865 coding upstream 792264 12073631 ~ 12092223 (+)
mknk2 mknk2,mknk2b,LOC107695256,LOC107585877,LOC107731184 coding downstream 20357 12907246 ~ 12932059 (+)
rexo1 NA coding downstream 50971 12937860 ~ 12957220 (+)
LOC103042874 LOC108415051 coding downstream 86031 12972920 ~ 12978309 (+)
csnk1g2 csnk1g2,LOC106925954,LOC106953035,LOC103468226,LOC104921814 coding downstream 94083 12980972 ~ 13031555 (+)
mfsd12 mfsd12,LOC107550005 coding downstream 148989 13035878 ~ 13050527 (+)
G51604 NA non-coding upstream 144880 12698789 ~ 12739607 (+)
G51589 NA non-coding upstream 231049 12651997 ~ 12653438 (+)
G51588 NA non-coding upstream 236070 12623596 ~ 12648417 (+)
G51583 NA non-coding upstream 340537 12540224 ~ 12543950 (+)
G51582 NA non-coding upstream 368603 12515101 ~ 12515884 (+)
G51687 NA non-coding downstream 35658 12922547 ~ 12923902 (+)
G51708 NA non-coding downstream 206285 13093174 ~ 13093548 (+)
G51713 NA non-coding downstream 218995 13105884 ~ 13106608 (+)
G51724 NA non-coding downstream 273290 13160179 ~ 13165729 (+)
G51726 NA non-coding downstream 280805 13167694 ~ 13175028 (+)
znf692 znf692,LOC108442337,LOC107750903,LOC107695246,LOC106613837 other upstream 435971 12437404 ~ 12448516 (+)
LOC103022344 foxd1,LOC103022344,LOC108265081,LOC106569011 other upstream 755187 12084080 ~ 12129300 (+)
G51423 cunh1orf21,zgc:92140,LOC107676598,LOC107585858,LOC107750760,LOC107700167,LOC107548740 other upstream 1002466 11832681 ~ 11882021 (+)
LOC103038184 acsl2,LOC107553163,LOC107710839,LOC107665192,LOC107716609,LOC108426687,LOC107678403 other upstream 2127232 10687885 ~ 10757255 (+)
nfu1 nfu1,LOC108265347,LOC107553147,LOC105890045 other upstream 2753686 10123720 ~ 10130801 (+)
G51743 dohh,LOC107745802,LOC107695215,LOC107585881,LOC107548993 other downstream 428850 13315739 ~ 13327325 (+)
G51745 NA other downstream 469836 13356725 ~ 13368274 (+)
LOC103034181 prrg1,LOC108444325,LOC107585847,LOC107657931,LOC107700656,LOC107750596 other downstream 1282555 14169444 ~ 14201302 (+)
G52110 sh3gl1,sh3gl1b other downstream 1419725 14306614 ~ 14324917 (+)
G52249 NA other downstream 2031555 14918444 ~ 14918850 (+)

Expression


Co-expression Network