G51743 (dohh,LOC107745802,LOC107695215,LOC107585881,LOC107548993)


Basic Information

Item Value
gene id G51743
gene name dohh,LOC107745802,LOC107695215,LOC107585881,LOC107548993
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 13315739 ~ 13327325 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU69787
AAGTGGCAGCAAACACACGCActttatatttacaatacaaGCCAAGTCTGTTGTACattaaatgttataataatataatagttgtgtggtattagtttaagcagactgtgtttgtctaatgttgtgacttagatgaagatcagaacacatttactGACCCATTTATGCAAagatccaagtaatcccaaagagttctaatattttatatatataatacaataaaacaggTCCAGCAAATGGTCaaaccatttaaaatatttatttacgtTGAAAGCTTTGAAGTTCAGAAGAAGTCTTTACAAAACCACGGAGGGGGACTAAGGCCAGTATAATCAGGACCAGGGCTGAGTTTCCCAAAGGCATCTTAGTGTTGAGATCATtttaaatgagagagagagagagacagtgtTCTGCTCGCTCGCCCATTTATCAACCTTGTTTTTTGCTGAGATGGTTTTGGGAAACCGAGCCCAGAACTCGAGAGCAGGTCCTCAGAAAGCCAGGTGTGTTAAAGTGCTAAAGAGCCACAGCAGAAGAGCCGCTCTCactgagcagcagcagtggcagtggCAGCATTCGCTCGTATGAGTCCGTCAGCGTACTGGAACTGTCCGCTGTTCTCGTACTCCAGCATGTCCAGAGCCACCTCACAGCTCTCCTTCACCACCCGCTCTCGGTCCTGACGGTACTGCTGCAGGATGGGCACACACGCGTCCTTGCCGATAGACCCCAGCGCCTCGGCACACTCGTGCCGCACCATGGCGTTCTCATCCACCTTCTCCAGAGCCGCGCGCAGCTGAGGGATGCTGGCCTCGTGCTGTATCTGACCCAAGACGTAGCCGATCTCGTGACGGAACAAAGCGCTGCTGCACTGGAGGCCt
>TU69789
GATTAATATGAGCAGCAGTGGcagtggcagtggCAGCATTCGCTCGTATGAGTCCGTCAGCGTACTGGAACTGTCCGCTGTTCTCGTACTCCAGCATGTCCAGAGCCACCTCACAGCTCTCCTTCACCACCCGCTCTCGGTCCTGACGGTACTGCTGCAGGATGGGCACACACGCGTCCTTGCCGATAGACCCCAGCGCCTCGGCACACTCGTGCCGCACCATGGCGTTCTCATCCACCTTCTCCAGAGCCGCGCGCAGCTGAGGGATGCTGGCCTCGTGCTGTATCTGACCCAAGACGTAGCCGATCTCGTGACGGAACAAAGCGCTGCTGCACTGGAGGCCt

Function

symbol description
dohh Predicted to enable deoxyhypusine monooxygenase activity and iron ion binding activity. Predicted to be involved in peptidyl-lysine modification to peptidyl-hypusine. Orthologous to human DOHH (deoxyhypusine hydroxylase).

NR:

description
PREDICTED: deoxyhypusine hydroxylase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU69787 True 881 lncRNA 0.47 2 13326424 13327325
TU69789 False 344 TUCP 0.61 2 13315739 13327325

Neighbor

gene id symbol gene type direction distance location
nfic nfic,LOC107585880,LOC107676860,LOC107745803 coding upstream 21545 13099021 ~ 13294194 (+)
mfsd12 mfsd12,LOC107550005 coding upstream 265212 13035878 ~ 13050527 (+)
csnk1g2 csnk1g2,LOC106925954,LOC106953035,LOC103468226,LOC104921814 coding upstream 284184 12980972 ~ 13031555 (+)
LOC103042874 LOC108415051 coding upstream 337430 12972920 ~ 12978309 (+)
rexo1 NA coding upstream 358519 12937860 ~ 12957220 (+)
fzr1 fzr1,fzr1a,LOC105904033 coding downstream 6653 13333978 ~ 13347411 (+)
LOC103034215 asic1a,LOC108439661,LOC108264980,LOC107584862,LOC107696918,LOC107751588,LOC107674327,LOC101077772 coding downstream 62900 13390225 ~ 13417500 (+)
LOC103032945 gpd1a,LOC103032945,LOC108264983,LOC107751598,LOC107696907,LOC107552204,LOC106566713 coding downstream 98854 13426179 ~ 13443313 (+)
erich3 NA coding downstream 143996 13471321 ~ 13497670 (+)
lrriq3 NA coding downstream 206101 13533426 ~ 13541536 (+)
G51747 NA non-coding upstream 9986 13304994 ~ 13305753 (+)
G51682 NA non-coding upstream 25686 12835742 ~ 13290053 (+)
G51732 NA non-coding upstream 122590 13186209 ~ 13193149 (+)
G51726 NA non-coding upstream 140711 13167694 ~ 13175028 (+)
G51724 NA non-coding upstream 150010 13160179 ~ 13165729 (+)
G51753 dohh,LOC107695215,LOC106584359,LOC107548993 non-coding downstream 3897 13331222 ~ 13332988 (+)
G51760 NA non-coding downstream 35001 13362326 ~ 13366445 (+)
LOC111192614 LOC101072313 non-coding downstream 52169 13379494 ~ 13384594 (+)
G51812 NA non-coding downstream 312559 13639884 ~ 13640119 (+)
LOC111192616 NA non-coding downstream 449697 13777022 ~ 13784454 (+)
znf692 znf692,LOC108442337,LOC107750903,LOC107695246,LOC106613837 other upstream 867223 12437404 ~ 12448516 (+)
LOC103022344 foxd1,LOC103022344,LOC108265081,LOC106569011 other upstream 1186439 12084080 ~ 12129300 (+)
G51423 cunh1orf21,zgc:92140,LOC107676598,LOC107585858,LOC107750760,LOC107700167,LOC107548740 other upstream 1433718 11832681 ~ 11882021 (+)
LOC103038184 acsl2,LOC107553163,LOC107710839,LOC107665192,LOC107716609,LOC108426687,LOC107678403 other upstream 2558484 10687885 ~ 10757255 (+)
nfu1 nfu1,LOC108265347,LOC107553147,LOC105890045 other upstream 3184938 10123720 ~ 10130801 (+)
G51745 NA other downstream 29400 13356725 ~ 13368274 (+)
LOC103034181 prrg1,LOC108444325,LOC107585847,LOC107657931,LOC107700656,LOC107750596 other downstream 842119 14169444 ~ 14201302 (+)
G52110 sh3gl1,sh3gl1b other downstream 979289 14306614 ~ 14324917 (+)
G52249 NA other downstream 1591119 14918444 ~ 14918850 (+)
LOC111192620 NA other downstream 1669829 14997154 ~ 15003357 (+)

Expression


Co-expression Network