G51745


Basic Information

Item Value
gene id G51745
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 13356725 ~ 13368274 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU69793
CCAAGAGCAGATACATCATCCTCTACATCCAAGGCAGCGGTCTTCTCCTCCAGAGCCGTGTGCTGTTTTGCAGCCAGAGTTTGCAGGGCTAAGAGCACTTGATTTGAAGGGTGAGAATGCAGAACATCCTAAAGAGAGCAAGAGGTTTTCAAAAGGTTAATTTATTTTGGTCCTTCATATACATAAAACTAATTATTTGTATTGTGTaactaacacaaacacacaaaatcaTAGCCCACCTGTACAGCACTGAGCCAATGCTGGTAAGCTGCGTTCCTCTGAGCAGGAGTAAATTCAGACGTGGCCTTCAGCATGCTGTCTTGCAGAGATCGGAAGAACAGGACTCTCTCATTGCAGAGCTCACGAATGTCTCTTAAAACCAGTGGCTCTGCAGCCATGCCAGTGTTCCCGCCGTCCGACGATCCAAACACCAGCTTCACTTCAGCTTTTTTGGAGAGCTGGTCCAGAGCTTGCCGCTTGGTGCTGATCTTCTGTGTGTCCTCTATGAGGGAGTTTCGTTCATCTGCACAGCGCTGCCTGAAGGAGTCTAACATCAGCTCCCTCAGCCTGCTCTCCTCATACAGCTCCCAGTGCCTGCCTACGTTCTTCTCTTCATTAGTGAGCTGATCCTCTGCTGAGCTGATCTTGTGGTCTAATTGAGATAGCTCAGCCTGCAGTTCCTCAATCTCCCTCTGCAGCTGCAAACGCTGAGCATCTTTATTCTGCCCCTCCACCTGCTTCAGCTCTTTATCCTGCACAACTTTGTACCATTGGAGATTTTCTCGCATAAGTCTCACGTtcCTCTCGTGGTAAACATGCTTAATGACATATTTCCAAATTGATGCTCCTGGGCCAACACATAATGTTTTAATGTAGCTGTCGTGAGGAAGTTTGGGAGGGGGAAACTGCAGCTCTTCAGTCGCCCAGCGCTTCACCTCCTGAAATAAACTCCCCATTTCACCCCAAATCTACAGaacaatactttattttatattataaaggtATTAATGAATCAGTCTCAGCTCCTCCTGAACCCACACTGCTGTTAGCACTCAGGCTAACTGTCCTGCTCCCCGGTTCCTGACGATACGGAACTACTTTAACCCACTTTTAGTGGTTTTGTCGTGTGAAATATGGTGAGGAAACACCGCTGGTAAAACTGCCGTATAAAACCGCTTATGGAAGTTTATaatggatttattatttttatgttcaaATTTCCTCGCGCTTCCCGCTGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU69793 True 1239 TUCP 0.46 9 13356725 13368274

Neighbor

gene id symbol gene type direction distance location
fzr1 fzr1,fzr1a,LOC105904033 coding upstream 9314 13333978 ~ 13347411 (+)
nfic nfic,LOC107585880,LOC107676860,LOC107745803 coding upstream 62531 13099021 ~ 13294194 (+)
mfsd12 mfsd12,LOC107550005 coding upstream 306198 13035878 ~ 13050527 (+)
csnk1g2 csnk1g2,LOC106925954,LOC106953035,LOC103468226,LOC104921814 coding upstream 325170 12980972 ~ 13031555 (+)
LOC103042874 LOC108415051 coding upstream 378416 12972920 ~ 12978309 (+)
LOC103034215 asic1a,LOC108439661,LOC108264980,LOC107584862,LOC107696918,LOC107751588,LOC107674327,LOC101077772 coding downstream 21951 13390225 ~ 13417500 (+)
LOC103032945 gpd1a,LOC103032945,LOC108264983,LOC107751598,LOC107696907,LOC107552204,LOC106566713 coding downstream 57905 13426179 ~ 13443313 (+)
erich3 NA coding downstream 103047 13471321 ~ 13497670 (+)
lrriq3 NA coding downstream 165152 13533426 ~ 13541536 (+)
LOC103027247 ssbp3b,LOC108439398,LOC108265320,LOC107699856,LOC107585824,LOC107710925,LOC107657912 coding downstream 197755 13566029 ~ 13590816 (+)
G51753 dohh,LOC107695215,LOC106584359,LOC107548993 non-coding upstream 23737 13331222 ~ 13332988 (+)
G51747 NA non-coding upstream 50972 13304994 ~ 13305753 (+)
G51732 NA non-coding upstream 163576 13186209 ~ 13193149 (+)
G51726 NA non-coding upstream 181697 13167694 ~ 13175028 (+)
G51724 NA non-coding upstream 190996 13160179 ~ 13165729 (+)
LOC111192614 LOC101072313 non-coding downstream 11220 13379494 ~ 13384594 (+)
G51812 NA non-coding downstream 271610 13639884 ~ 13640119 (+)
LOC111192616 NA non-coding downstream 408748 13777022 ~ 13784454 (+)
G51978 NA non-coding downstream 489372 13857646 ~ 13857987 (+)
G51979 NA non-coding downstream 491625 13859899 ~ 13860167 (+)
G51743 dohh,LOC107745802,LOC107695215,LOC107585881,LOC107548993 other upstream 29400 13315739 ~ 13327325 (+)
znf692 znf692,LOC108442337,LOC107750903,LOC107695246,LOC106613837 other upstream 908209 12437404 ~ 12448516 (+)
LOC103022344 foxd1,LOC103022344,LOC108265081,LOC106569011 other upstream 1227425 12084080 ~ 12129300 (+)
G51423 cunh1orf21,zgc:92140,LOC107676598,LOC107585858,LOC107750760,LOC107700167,LOC107548740 other upstream 1474704 11832681 ~ 11882021 (+)
LOC103038184 acsl2,LOC107553163,LOC107710839,LOC107665192,LOC107716609,LOC108426687,LOC107678403 other upstream 2599470 10687885 ~ 10757255 (+)
LOC103034181 prrg1,LOC108444325,LOC107585847,LOC107657931,LOC107700656,LOC107750596 other downstream 801170 14169444 ~ 14201302 (+)
G52110 sh3gl1,sh3gl1b other downstream 938340 14306614 ~ 14324917 (+)
G52249 NA other downstream 1550170 14918444 ~ 14918850 (+)
LOC111192620 NA other downstream 1628880 14997154 ~ 15003357 (+)
G52263 NA other downstream 1635162 15003436 ~ 15003895 (+)

Expression


Co-expression Network