G51958


Basic Information

Item Value
gene id G51958
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 13639888 ~ 13640119 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU70090
aaagtcaaagtcaaagtcaaagtggtttttattgtcatttcagctatatacagagtacacagtgaaacgaaacaacgttcctccaaggaccatggtgcacataaacacagtgtagacagaacaatagtgcaacagtacaaaaagtgcagacagacaatacaacacaatacagacaaagaataataaataacaagacagtgtgcaaattttgcagtgtgcaaaaaagaccagg

Function

NR:

description
PREDICTED: AT-rich interactive domain-containing protein 4B isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU70090 True 232 lncRNA 0.37 1 13639888 13640119

Neighbor

gene id symbol gene type direction distance location
dio1 dio1 coding downstream 42080 13594155 ~ 13597808 (-)
LOC103030626 LOC108439397,LOC107710923,LOC107548485,LOC107585821,LOC107657911 coding downstream 76400 13545691 ~ 13563488 (-)
fpgt NA coding downstream 106655 13528757 ~ 13533233 (-)
LOC103033588 tnni3k,LOC107550356,LOC107743849,LOC107657874,LOC107699804,LOC107710912 coding downstream 113008 13499464 ~ 13526880 (-)
LOC103033893 NA coding downstream 172627 13460464 ~ 13467261 (-)
LOC103026255 elovl8b,LOC103026255,LOC108442366,LOC107657928,LOC108265939,LOC107585829,LOC107699894 coding upstream 101589 13741708 ~ 13750155 (-)
mutyh mutyh,LOC103399401 coding upstream 111480 13751599 ~ 13759781 (-)
c6h1orf228 NA coding upstream 120550 13760669 ~ 13768994 (-)
LOC103024702 guk1b,LOC103024702,LOC107585833,LOC107758268,LOC107657930,LOC107750510,LOC108442369,LOC105895130,LOC105895024 coding upstream 130042 13770161 ~ 13785329 (-)
LOC103027869 LOC108442365 coding upstream 150414 13790533 ~ 13854271 (-)
G51941 NA non-coding downstream 149689 13487919 ~ 13490199 (-)
G51932 NA non-coding downstream 205343 13433901 ~ 13434545 (-)
G51842 NA non-coding downstream 237645 13367425 ~ 13402243 (-)
G51919 NA non-coding downstream 273053 13364816 ~ 13366835 (-)
G51916 NA non-coding downstream 275213 13362648 ~ 13364675 (-)
G51992 NA non-coding upstream 239280 13879399 ~ 13885559 (-)
G52024 NA non-coding upstream 372254 14012373 ~ 14014008 (-)
LOC111192619 LOC108442363 non-coding upstream 398221 14038340 ~ 14063185 (-)
G52064 NA non-coding upstream 458892 14099011 ~ 14100478 (-)
G52127 NA non-coding upstream 519657 14159776 ~ 14160951 (-)
LOC111192615 ssbp3b,LOC108439398,LOC108265320,LOC107585824,LOC107699856,LOC107710925,LOC107657912 other downstream 46941 13565998 ~ 13592947 (-)
smim24 NA other downstream 316205 13285303 ~ 13323683 (-)
LOC103042573 cunh1orf21,zgc:92140,LOC107676598,LOC107585858,LOC107750760,LOC107700167 other downstream 1757947 11831802 ~ 11881941 (-)
G51346 NA other downstream 2435465 11204054 ~ 11204423 (-)
G51187 kansl3,LOC107678435 other downstream 3323421 10313482 ~ 10316467 (-)
G51960 glis1 other upstream 23282 13663401 ~ 13664114 (-)
G52161 NA other upstream 768817 14408936 ~ 14411611 (-)
G52299 NA other upstream 1436177 15076296 ~ 15084568 (-)
LOC103028883 LOC108430093 other upstream 2521521 16161640 ~ 16219847 (-)
G52493 NA other upstream 2542616 16182735 ~ 16185312 (-)

Expression


Co-expression Network