Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC111192725 |
| gene name | NA |
| gene type | misc |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035902.1 |
| NCBI id | CM008305.1 |
| chromosome length | 52532229 |
| location | 16343756 ~ 16356960 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| id | description |
|---|---|
| K17517 | CLEC12B; C-type lectin domain family 12 member B |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU70869 | False | 269 | lncRNA | 0.50 | 2 | 16343756 | 16353965 |
| XM_022670951.1 | True | 1231 | mRNA | 0.48 | 6 | 16350939 | 16356960 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| shbg | NA | coding | downstream | 184040 | 16140670 ~ 16159716 (-) |
| neurl4 | neurl4 | coding | downstream | 214380 | 16086166 ~ 16129376 (-) |
| LOC103030780 | LOC108430129 | coding | downstream | 308660 | 15980633 ~ 16035096 (-) |
| LOC103030471 | nsfb,LOC108430134,LOC108273757,LOC107665886,LOC107657277 | coding | downstream | 370748 | 15919470 ~ 15973008 (-) |
| LOC103031338 | rhoc,LOC108427591,LOC105908082,LOC107729745,LOC103035456,LOC108271788,LOC107668165,LOC105902219 | coding | downstream | 988046 | 15295000 ~ 15355710 (-) |
| LOC103032046 | NA | coding | upstream | 6653 | 16363613 ~ 16374341 (-) |
| LOC103024300 | mkx,LOC108274364,LOC107665863,LOC107738971,LOC107549415,LOC107584376 | coding | upstream | 465287 | 16822247 ~ 16928239 (-) |
| LOC103037795 | mpp7,mpp7a,LOC107657298,LOC107665879 | coding | upstream | 832855 | 17189815 ~ 17464293 (-) |
| LOC111192622 | NA | coding | upstream | 1111091 | 17468051 ~ 17476591 (-) |
| LOC103035515 | NA | coding | upstream | 1291491 | 17648451 ~ 17665261 (-) |
| G52538 | NA | non-coding | downstream | 3789 | 16292416 ~ 16339967 (-) |
| G52547 | NA | non-coding | downstream | 44055 | 16296010 ~ 16299701 (-) |
| G52540 | LOC107584402,LOC108430072,LOC107733451,LOC107657288,LOC107738984,LOC107556576 | non-coding | downstream | 50684 | 16285052 ~ 16293072 (-) |
| G52543 | NA | non-coding | downstream | 54211 | 16261118 ~ 16289545 (-) |
| G52542 | NA | non-coding | downstream | 88278 | 16255142 ~ 16255478 (-) |
| G52559 | NA | non-coding | upstream | 18187 | 16375147 ~ 16376685 (-) |
| G52560 | NA | non-coding | upstream | 20039 | 16376999 ~ 16378858 (-) |
| G52565 | mfsd8 | non-coding | upstream | 41238 | 16398198 ~ 16402965 (-) |
| G52654 | NA | non-coding | upstream | 238211 | 16595171 ~ 16651572 (-) |
| G52655 | NA | non-coding | upstream | 265789 | 16622749 ~ 16677399 (-) |
| G52503 | polr2a | other | downstream | 116582 | 16226236 ~ 16227174 (-) |
| LOC103028883 | LOC108430093 | other | downstream | 123909 | 16161640 ~ 16219847 (-) |
| G52493 | NA | other | downstream | 158444 | 16182735 ~ 16185312 (-) |
| G52299 | NA | other | downstream | 1259188 | 15076296 ~ 15084568 (-) |
| G52161 | NA | other | downstream | 1932145 | 14408936 ~ 14411611 (-) |
| zcchc4 | NA | other | upstream | 49759 | 16406719 ~ 16427613 (-) |
| G52652 | NA | other | upstream | 231190 | 16588150 ~ 16589783 (-) |
| G53164 | NA | other | upstream | 2229441 | 18586401 ~ 18667287 (-) |
| LOC103025665 | glud1b,LOC108430434,LOC107698813,LOC107700126,LOC107739271,LOC107550058,LOC107749346 | other | upstream | 3165742 | 19522702 ~ 19570378 (-) |
| G53382 | NA | other | upstream | 3492990 | 19849950 ~ 19850350 (-) |
