epc1 (epc1,LOC108430856)


Basic Information

Item Value
gene id epc1
gene name epc1,LOC108430856
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 24254187 ~ 24290765 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU72954
agttttttttttttaattattattttatttgtacaacaacagacaattatttttgtatcctgttttgttagtttttgttttcagttcttgTGGTGAAGCGACTTTGTGCTTCGCGTAATGGAAGAGTTCGTTTTTGGTTGCTCGTCAGTGTAGCGTTCACTAATGAGCGAATGACAGTCCATTATTGCTGTGACCGTGTCATATTTTTTCAGCTCCAAGACACgctggacagagagagagcaggagtcGCTGCCCAGCTCCGATCTCCTCAACCTCAGTCTCTAACCGCACCAACAGACTCCAGACTATTTTAAGGCCTAAAACCACAAGTTAAAAGGTGTGCCTTCCTTTGGGAATATACTGCTTCGTCTCTTCCATGAAGAGGATGGCTCTCGGGCAAGGCTGCAGTACTGCAGTCCTGGCTTGTCCGGAGCACAGGTCTCCGATGCCCAGTCCACTGGCTGAACTGAACACCCTCCAGAGCTCTAGTCCAACCTGGTGGCAGACAAAGAAtgaaaaatattggaaatctaaaaaaaaaaaaaaaaaagatgaaatattATTAAAGTGTGAGGGGGGATATGTGACAGTTCCCACAGAAATCTGACAATAAAGCCCAGGTTAAGTCGAATGA
>XM_007259674.3
cattCGTTAGATTGTGTATTCAATTTAATggaattaatttgtattttactaatttcttttttttcttttaataaataatttattttattttttatatattatttattttttggcagtTCTGGTCCTTCACATGCATACATGTAGCTAATATTCTTATTATTGCCCTTCGTCCTCGCACAGTCACAAAAACAAACCTGTCCGTGTGTGTTTCTCTCCCCACCCCCCGTCCTCCGCCCCTCTGTTCGCGCAGGCGCGCTAGGCCGAGTGCGAATGGCTGGTGTGTGAGTGAGCGGGGGGAGGGGGGCTGGGCCGCAGGAAGCGAGCGGAGCGCTAGCTAAGCTACAGAGTTTGTAATGTCCGCCATGTTGGCCATGGCGTGCTGAAGCGGGATCCAGAGCGGCTCTGCGGGCGAACACAGAGCGACCAGAGCACCAGGACCCGGGCCGCCCGGCTCCTCCCAGCCTCCCGCTGCAGTGAAACCGCCGACAAGCGGCTCCTGCTGACCGCCACGGACTTCTCAATGAGAGCGCTAACGGGCTGGCTGGCGAATCTGAGCGGACCCGCTACATTTATGCTCGATCTCTCGGTGTAAACATGAGCAGTAAGCTGTCGTTTCGGGCGCGGGCGCTGGACGCCGCCAAGCCCCTTCCCGTCTTCCGCTGCGAGGACCTACCGGACCTGCATGAGTATGCCTCCATCAACCGGGCCGTGCCGCAGATGCCGACGGGgatggagaaggaggaggaatcGgAACACCATCTCCAGAGGGCCATCTCAGCACAGCAGGTCTACGGGGAGAAGAGGGACAACATGGTGATCCCCGTGCCCGAAGCAGAAAGCAACATCTCCTACTACGAGTCCCTCTACCCAGGGGACTTCAAGATGCCAAAGCAGCTCATTCACATACAGCCTTTCAGTCTGGACACAGAGCAGCCAGACTATGACCTGGACTCTGAAGACGAGGCGTTTGTGAACAGGCTGAAGAAAAAGATGGAGGTGGGGGCACTGCAGTTTGAGCTGATGATCGACCGCCTGGAAAAAGGCAGCGGCCAGCAGctaGTGACTCTGCAAGAAGCTAAGCTCCTACTGAAGGAAGATGATGAGCTGATCAGGGAGGTGTTTGAGTACTGGAGCAGGAAGAGGAAATCGTGTAAAAATGGTTCCCTCACACCAACAGTCAAACAGGAAAAGCGAGACGGCTCCAGCACCAGTGACCCCTATGTGGCCTTCAGGCGCAGGACTGAAAAAATGCAAACCAGAAAGAACCGCAAGAATGACGAAGCATCGTATGAGAAGATGCTGAAGCTGAGGAGAGACCTGAGTAGGGCAGTCACCATTCTGGAGATGATCAAGAAACGTgagaagagcaagagagaacTGTTGCACCTCACTCTTGAGATTGTGGAGAAGAGGAATGGCATGTCCGACTTTGGTGTTGATATCATGGCAGAGGCACTGGCCATGGCCAAGCCCATTTACAAAATTCCCATCATTCCCTTGGTCAGCAGCAACCAGTACCGCCACACAGACCATGTTGAGCCCAAGGACTTTAAGATTAAGCCGGAGAAGACAGAGGTGTCCCGCACTAAGAGGAAATATGAGAAGAAACCGAAGGCCCAGCCGTTCTCCACCCCACAACAGTCTGGCCCATCCCTTTTCAGTCCAAAAGACCTCAACCAATATGACTTTCCCAGCTCTGATGAAGATCCGTTCTCACAGATGCATTCTGGGTCGTCGGAGGCTGAGGAGGACAATGATCCTGATGGACCATTTGCCTTCAGGAGGAAAGCTGGCTGTGTTTACCGTGCTGCTCGTTTGGATCAGAGAGGTGGTTGGCCGTGGTGTAGTGAGGCTGAAGGTGGGTCTTGTGACCCGCGGTTCCGGTACTCTCTCACCAGCCTGTCGGCACCGCACCGCTGTCTCGGTTTCGCACGCCGAAGAGTGGGACGAGGTGGGAGAGTTCTCCTGGACCGTGCCCACTCGGATCTAGACAACGTTTTCCACAGTCTGGATTCAACTTCAGAAGAGTTATCACCTGCTGCTTCTTCAATTCACCCAGGAAACACTTTCAACAGTAACTCTACGGTGGCGCCCACCTCATCGCCAGCTTCATCCCCCTGCCCCTCCTCTTCCCTGCATCTGAGGCAGATTCTCCGCAACATTAAGGCCTGCCGATGGAGACACTTTAAACCACGGACACTAACGGGCAGGGGCTCCTGCCAAGCTGCCGCCACCGTTGCGGCGGGATCAGGCACTAACGCGCCGGCCGGAGGAGTTGCTACAGTAACGCCTGCAGCCGtgttcaCTGCAGAGCAGTACCAGGAGCATCAAGAACAGCTGGCTCTCATGCAGAAACAACAGCTGGAGCAGATCCAGCAGCAGGCCAGCGATGCCTCCAACAATACACAGTCTTTTGTGTCCAAGACTTTGGATTCAGCCAGCGCTCAGTTTGCTGCCTCTGCTCTAGTCACCTCTGACCAGCTGTTGACTCTCAAAGTCAAAGAGGATGGTGTTCTGGGAAGTGGAGTTAATGGTATCCTCCAGGCCTCAGGAGTTTACAAGGGCTTACAACTTTCTGCTACATCATCAGCTTCAATCCTCCCAAGCCCATCTCCAGTGATGACCTCTCCCCCACCTATCTTACCCCCTACTAATAGTAATAGCTTGACCACAGGCTCTGTCCACAATGCACACAACCCACTCAGCAACCATGGTAACAATACTGCCAACGCGGTTCCTCAGGTTCTGATTGGGAACAATCTGCGTCTGAGTGTGGCGACTCCCCAGATCGCACGCCACCTTCCCAGAAGTCTCGGCGGCGTACCGCCTGCTGCCTTAAAACTAGCAGCCGCTGCTTCCAACTGTCAGCTCCCCAAAGTCACGCCTGGGGAGAATCGCGAACCGGAAAAGCAGTCCCTAAGTCTAGCGGAAAACACAGTCGCTATGGAAGTGACGTAGTGACCGTTGCCTGGGCGACACTTTCCTCGCCCAGTCCATCTTTTGGTGCTGTGCACCAAATTGCTTTCGGGAATGCAAAGGGACAGCGGGTTTCCACAGCAACTGTCAGGCCTCGACAGTGAATCTCATctctttaatataatttttcttCACCCCccaatttttaatatatatattcgtTACTGTTAATAAGAGAAAATAATTCATATGTAAATTAAGAATATGGTGAATATTCAATGTACAGTAACTGCCTATTTGTAAACCTTTCTGCTCCACCCCCCAAAACCTTGTATATATGTTACTTGAAAACAGATTTGTTCATTTGTGATGTTTTGCACTTGGGAATGACAAAAGcagaaggagaaagaggaggaggaaaagaatgcagagagagattgtgtgcGTGAGCCGTGTAGCAGAAGAAAAGGTTTTGAGAATCATTGCTTTGTGCATGGTGAGGAAACCTGCTGTTTTACCTATTTATTGTGCTGTGTTTacacttttgtttgtttttcattctttattcATGAACACTGTACCCTCATTTGTTCCTGTTTCGATGTTTGGGTAGCTAGAATCTCTTTTCTGAAAAGATTTTCAGCTTCTGGCCCTTCATTTTCTTGTTCTACTGGTTCTCTTGCAAATCAATTGGATGCTACAGAAAGATTGCATTTTGTTTTCCactgccttttttatttatttattttctttccccccattacctttttcttttttttctgagggAGGGGAGGAGGGTGGGTTGTGGTATGTAGTTTTTGGGTAACTCAAAAGCTTTGGGAATGGTGGGTTTAGAGAAATCTTCTGTTTAACTAATCATCCCGAAACAAGTAACGGACAAGTCTTCACTCGGAAGCATCCATGGCTTCCATCTCAACTAAgcactgtttttgtttattttgtattttattgtttttgttgacTTCAGTAATGATTATCGCTGCTTTTGTGTCATTTTTGTTTTCATACTATGAAATGTTTTGCCTCccattgtagattttttttttattattttatttgtacaacaacagacaattatttttgtatcctgttttgttagtttttgttttcagttcttgTGGTGAAGCGACTTTGTGCTTCGCGTAATGGAAGAGTTCGTTTTTGGTTGCTCGTCAGTGTAGCGTTCACTAATGAGCGAATGACAGTCCATTATTGCTGTGACCGTGTCATATTTTTTCAGCTCCAAGACACgctggacagagagagagcaggagtcGCTGCCCAGCTCCGATCTCCTCAACCTCAGTCTCTAACCGCACCAACAGACTCCAGACTATTTTAAGGCCTAAAACCACAAGTTAAAAGGTGTGCCTTCCTTTGGGAATATACTGCTTCGTCTCTTCCATGAAGAGGATGGCTCTCGGGCAAGGCTGCAGTACTGCAGTCCTGGCTTGTCCGGAGCACAGGTCTCCGATGCCCAGTCCACTGGCTGAACTGAACACCCTCCAGAGCTCTAGTCCAACCTGGTGGCAGACAAAGAAtgaaaaatattggaaatctaaaaaaaaaaaaaaaaaagatgaaatattATTAAAGTGTGAGGGGGGATATGTGACAGTTCCCACAGAAATCTGACAATAAAGCCCAGGTTAAGTCGAA
>XM_007259675.3
AGCTGTAGTGATCAGAAAAAACGCCTTTAGCTACTTTTGTCGCCAGTTTAGTTGGGGAAACCTGGTGTGGATGTGGTTTATTTCTTTTCAGACAAGTGATCCCCGTCGAATTGAGGATCATGCGggctttgggaaacactctggGGTGTTTTTTTGCGCTGCGTGGCGTTTTGTTGTCTCGCAGATCCAACTATGCAGCCTTTACACGGTTATGGACTAGCTGTTTTAGCTTGTCATGTTCAACACAGTTGCCACCCCGTCCACCCTAAAGGTTAATCCGGTCTTGGAGGATTTAAACTATTGGATAATATGGATACTATTTTACGCAAACATGCTGCTGTCTGCAGTATGGTGCAGAAGCGTAAAGgAACACCATCTCCAGAGGGCCATCTCAGCACAGCAGGTCTACGGGGAGAAGAGGGACAACATGGTGATCCCCGTGCCCGAAGCAGAAAGCAACATCTCCTACTACGAGTCCCTCTACCCAGGGGACTTCAAGATGCCAAAGCAGCTCATTCACATACAGCCTTTCAGTCTGGACACAGAGCAGCCAGACTATGACCTGGACTCTGAAGACGAGGCGTTTGTGAACAGGCTGAAGAAAAAGATGGAGGTGGGGGCACTGCAGTTTGAGCTGATGATCGACCGCCTGGAAAAAGGCAGCGGCCAGCAGctaGTGACTCTGCAAGAAGCTAAGCTCCTACTGAAGGAAGATGATGAGCTGATCAGGGAGGTGTTTGAGTACTGGAGCAGGAAGAGGAAATCGTGTAAAAATGGTTCCCTCACACCAACAGTCAAACAGGAAAAGCGAGACGGCTCCAGCACCAGTGACCCCTATGTGGCCTTCAGGCGCAGGACTGAAAAAATGCAAACCAGAAAGAACCGCAAGAATGACGAAGCATCGTATGAGAAGATGCTGAAGCTGAGGAGAGACCTGAGTAGGGCAGTCACCATTCTGGAGATGATCAAGAAACGTgagaagagcaagagagaacTGTTGCACCTCACTCTTGAGATTGTGGAGAAGAGGAATGGCATGTCCGACTTTGGTGTTGATATCATGGCAGAGGCACTGGCCATGGCCAAGCCCATTTACAAAATTCCCATCATTCCCTTGGTCAGCAGCAACCAGTACCGCCACACAGACCATGTTGAGCCCAAGGACTTTAAGATTAAGCCGGAGAAGACAGAGGTGTCCCGCACTAAGAGGAAATATGAGAAGAAACCGAAGGCCCAGCCGTTCTCCACCCCACAACAGTCTGGCCCATCCCTTTTCAGTCCAAAAGACCTCAACCAATATGACTTTCCCAGCTCTGATGAAGATCCGTTCTCACAGATGCATTCTGGGTCGTCGGAGGCTGAGGAGGACAATGATCCTGATGGACCATTTGCCTTCAGGAGGAAAGCTGGCTGTGTTTACCGTGCTGCTCGTTTGGATCAGAGAGGTGGTTGGCCGTGGTGTAGTGAGGCTGAAGGTGGGTCTTGTGACCCGCGGTTCCGGTACTCTCTCACCAGCCTGTCGGCACCGCACCGCTGTCTCGGTTTCGCACGCCGAAGAGTGGGACGAGGTGGGAGAGTTCTCCTGGACCGTGCCCACTCGGATCTAGACAACGTTTTCCACAGTCTGGATTCAACTTCAGAAGAGTTATCACCTGCTGCTTCTTCAATTCACCCAGGAAACACTTTCAACAGTAACTCTACGGTGGCGCCCACCTCATCGCCAGCTTCATCCCCCTGCCCCTCCTCTTCCCTGCATCTGAGGCAGATTCTCCGCAACATTAAGGCCTGCCGATGGAGACACTTTAAACCACGGACACTAACGGGCAGGGGCTCCTGCCAAGCTGCCGCCACCGTTGCGGCGGGATCAGGCACTAACGCGCCGGCCGGAGGAGTTGCTACAGTAACGCCTGCAGCCGtgttcaCTGCAGAGCAGTACCAGGAGCATCAAGAACAGCTGGCTCTCATGCAGAAACAACAGCTGGAGCAGATCCAGCAGCAGGCCAGCGATGCCTCCAACAATACACAGTCTTTTGTGTCCAAGACTTTGGATTCAGCCAGCGCTCAGTTTGCTGCCTCTGCTCTAGTCACCTCTGACCAGCTGTTGACTCTCAAAGTCAAAGAGGATGGTGTTCTGGGAAGTGGAGTTAATGGTATCCTCCAGGCCTCAGGAGTTTACAAGGGCTTACAACTTTCTGCTACATCATCAGCTTCAATCCTCCCAAGCCCATCTCCAGTGATGACCTCTCCCCCACCTATCTTACCCCCTACTAATAGTAATAGCTTGACCACAGGCTCTGTCCACAATGCACACAACCCACTCAGCAACCATGGTAACAATACTGCCAACGCGGTTCCTCAGGTTCTGATTGGGAACAATCTGCGTCTGAGTGTGGCGACTCCCCAGATCGCACGCCACCTTCCCAGAAGTCTCGGCGGCGTACCGCCTGCTGCCTTAAAACTAGCAGCCGCTGCTTCCAACTGTCAGCTCCCCAAAGTCACGCCTGGGGAGAATCGCGAACCGGAAAAGCAGTCCCTAAGTCTAGCGGAAAACACAGTCGCTATGGAAGTGACGTAGTGACCGTTGCCTGGGCGACACTTTCCTCGCCCAGTCCATCTTTTGGTGCTGTGCACCAAATTGCTTTCGGGAATGCAAAGGGACAGCGGGTTTCCACAGCAACTGTCAGGCCTCGACAGTGAATCTCATctctttaatataatttttcttCACCCCccaatttttaatatatatattcgtTACTGTTAATAAGAGAAAATAATTCATATGTAAATTAAGAATATGGTGAATATTCAATGTACAGTAACTGCCTATTTGTAAACCTTTCTGCTCCACCCCCCAAAACCTTGTATATATGTTACTTGAAAACAGATTTGTTCATTTGTGATGTTTTGCACTTGGGAATGACAAAAGcagaaggagaaagaggaggaggaaaagaatgcagagagagattgtgtgcGTGAGCCGTGTAGCAGAAGAAAAGGTTTTGAGAATCATTGCTTTGTGCATGGTGAGGAAACCTGCTGTTTTACCTATTTATTGTGCTGTGTTTacacttttgtttgtttttcattctttattcATGAACACTGTACCCTCATTTGTTCCTGTTTCGATGTTTGGGTAGCTAGAATCTCTTTTCTGAAAAGATTTTCAGCTTCTGGCCCTTCATTTTCTTGTTCTACTGGTTCTCTTGCAAATCAATTGGATGCTACAGAAAGATTGCATTTTGTTTTCCactgccttttttatttatttattttctttccccccattacctttttcttttttttctgagggAGGGGAGGAGGGTGGGTTGTGGTATGTAGTTTTTGGGTAACTCAAAAGCTTTGGGAATGGTGGGTTTAGAGAAATCTTCTGTTTAACTAATCATCCCGAAACAAGTAACGGACAAGTCTTCACTCGGAAGCATCCATGGCTTCCATCTCAACTAAgcactgtttttgtttattttgtattttattgtttttgttgacTTCAGTAATGATTATCGCTGCTTTTGTGTCATTTTTGTTTTCATACTATGAAATGTTTTGCCTCccattgtagattttttttttattattttatttgtacaacaacagacaattatttttgtatcctgttttgttagtttttgttttcagttcttgTGGTGAAGCGACTTTGTGCTTCGCGTAATGGAAGAGTTCGTTTTTGGTTGCTCGTCAGTGTAGCGTTCACTAATGAGCGAATGACAGTCCATTATTGCTGTGACCGTGTCATATTTTTTCAGCTCCAAGACACgctggacagagagagagcaggagtcGCTGCCCAGCTCCGATCTCCTCAACCTCAGTCTCTAACCGCACCAACAGACTCCAGACTATTTTAAGGCCTAAAACCACAAGTTAAAAGGTGTGCCTTCCTTTGGGAATATACTGCTTCGTCTCTTCCATGAAGAGGATGGCTCTCGGGCAAGGCTGCAGTACTGCAGTCCTGGCTTGTCCGGAGCACAGGTCTCCGATGCCCAGTCCACTGGCTGAACTGAACACCCTCCAGAGCTCTAGTCCAACCTGGTGGCAGACAAAGAAtgaaaaatattggaaatctaaaaaaaaaaaaaaaaaagatgaaatattATTAAAGTGTGAGGGGGGATATGTGACAGTTCCCACAGAAATCTGACAATAAAGCCCAGGTTAAGTCGAA

Function

symbol description
epc1 Predicted to contribute to histone acetyltransferase activity. Involved in histone H2A acetylation; histone H4 acetylation; and negative regulation of transcription, DNA-templated. Acts upstream of or within negative regulation of gene expression, epigenetic; negative regulation of transcription by RNA polymerase II; and positive regulation of transcription by RNA polymerase II. Located in nuclear membrane and nucleoplasm. Part of Piccolo NuA4 histone acetyltransferase complex.

NR:

description
enhancer of polycomb homolog 1 isoform X1

GO: NA

KEGG:

id description
K11322 EPC; enhancer of polycomb-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
TU72954 False 634 lncRNA 0.43 2 24273017 24290765
XM_007259674.3 True 4596 mRNA 0.49 14 24260322 24290762
XM_007259675.3 False 4213 mRNA 0.47 15 24254187 24290762

Neighbor

gene id symbol gene type direction distance location
LOC103038196 LOC108429178 coding upstream 27353 24215123 ~ 24226834 (+)
LOC103028344 cdh18,LOC108430851,LOC107568143,LOC107654555,LOC107582195,LOC108273706 coding upstream 301258 23754737 ~ 23952929 (+)
LOC103025909 LOC108429368,LOC107753275,LOC107582197,LOC108273705,LOC107654548 coding upstream 811120 23158042 ~ 23443067 (+)
LOC103025391 LOC108413004,LOC108273491,LOC107655938,LOC107654557,LOC107560959,LOC107753259 coding upstream 1523697 22495776 ~ 22730490 (+)
LOC103024857 abca5,LOC108430838,LOC107561411,LOC107684475 coding upstream 2054110 22157008 ~ 22200077 (+)
kif5b kif5b,LOC108430866,LOC107753262 coding downstream 40857 24331622 ~ 24356664 (+)
arhgap12 arhgap12 coding downstream 74079 24364844 ~ 24463165 (+)
znf438 NA coding downstream 350323 24641088 ~ 24715233 (+)
sncaip sncaip,LOC103399731 coding downstream 1006291 25297056 ~ 25304115 (+)
snx2 snx2 coding downstream 1032352 25323117 ~ 25346099 (+)
G54120 NA non-coding upstream 108201 24145688 ~ 24145986 (+)
LOC111192728 NA non-coding upstream 205290 23959449 ~ 24048897 (+)
G54093 NA non-coding upstream 371792 23881979 ~ 23882395 (+)
LOC111192638 NA non-coding upstream 529582 23569349 ~ 23724605 (+)
G54063 NA non-coding upstream 620801 23632913 ~ 23633386 (+)
G54130 NA non-coding downstream 20147 24310912 ~ 24359605 (+)
G54139 NA non-coding downstream 187481 24478246 ~ 24478730 (+)
G54141 zeb1,LOC107552760,LOC107666916 non-coding downstream 203660 24494425 ~ 24497418 (+)
G54177 NA non-coding downstream 417479 24708244 ~ 24709643 (+)
G54162 NA non-coding downstream 426870 24717635 ~ 24718198 (+)
G53804 ddit4 other upstream 2332593 21919225 ~ 21921594 (+)
LOC103028037 LOC108429162,LOC107684133,LOC108273534,LOC108430697,LOC108274369 other upstream 2507107 21673574 ~ 21747080 (+)
fbxo11 fbxo11,fbxo11b,LOC108430631,LOC105896971,LOC107728720,LOC107582786,LOC107550041 other upstream 3428513 20794025 ~ 20825674 (+)
cript cript,LOC107582781,LOC107728714 other upstream 3693239 20555314 ~ 20560948 (+)
LOC103044634 LOC108429329,LOC104923123,LOC108273985 other upstream 3790302 20344023 ~ 20463885 (+)
map3k8 map3k8,LOC107686375,LOC107584407,LOC107738976,LOC107665890 other downstream 801797 25092562 ~ 25108871 (+)
srp19 srp19 other downstream 1255227 25545992 ~ 25549494 (+)
LOC103040153 cdc14b,LOC108265480 other downstream 2246287 26537052 ~ 26551570 (+)
LOC103023473 tmem230,ct030,LOC103023473,LOC106579885,LOC107713020,LOC101077900,LOC105894893,LOC107553029 other downstream 2672127 26962892 ~ 26973026 (+)
G54682 es1,LOC108430344,LOC105894898,LOC107553036,LOC107671040,LOC107713034 other downstream 2729479 27020244 ~ 27022891 (+)

Expression


Co-expression Network