map3k8 (map3k8,LOC107686375,LOC107584407,LOC107738976,LOC107665890)


Basic Information

Item Value
gene id map3k8
gene name map3k8,LOC107686375,LOC107584407,LOC107738976,LOC107665890
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 25092562 ~ 25108871 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU73211
acttttttctcaaTTATGAAGACATAAACAGTTCCAATCACAGTTAAACAAGTTTAATCTGCTTGGTAATAAGATAAAAACTACATATTTGATATATAGGTGAACTTTGGCTGAGCAATCACAAAAAATAGCTCTGCAAAACCAGACAGAAACAGCCCTACAGCTTTAAATATATCGTATATATTTAAGTTGGCACTGCAGATTAATCaccttctggaaaaaaaaaaaagaacttaaataaaaaaaaagaagaaggaaaagtcCCAAAAGTTTGCATGGaagaaaaaatagcattaagcACTGAGGATGTGTCACATGGCTGTATTACAGTAAACGCACTGAGATGTGCACATACATGGAAAGGATTAACTAGACTGATATGATGCAGAGCCACATCCTGCCTTCTGCGGCCCAAGATAAGCACATAATACAGGGGGAAATGGATTGTTTGTCATGTTTTGTGTCTCTCTATCAATGCAGAGTGTATGTATAATTGTGTAATGTcaatgtccaatgaaaaacatgcatattTTTTAGCGTCAATATGcaatttttgcaattttttttttctttttttatcgtGAGGCTGGGCCACCttctaaaaaatagttttaacattaatattGATTACCTACAATGATTTTATACACTaacatgccacatgtcatgggacagaacCTTGTATTATGTCCCAttactttgctttgcttttccCATataagctaaagaatgctgcacagAATTGTGGGATATGCATGGAGATGATTTCTGCTAGAGAATCTTATCTAATCGTATGGACAGTTTTAGCCAGTAGCAACATCTTGCTAAAACTCACTCAGGGTGACCTCACTATAACTCAGATAATTCAtgtcgccttgccatgagcacactggccagtgttcagcctcactcacaagataacccctcacaacttacacagtcCCATAATCAATTTGCATTCTGCTGTTCCATGGAGTCTTCATGacgtttggcatgtcagtgtaacaGTATACCATTCTGAAAATATGTTAtggtgaaaaagagagaaagttcaTGATGTGTATTCTACAGTATGTTTATCATAGTTATAGATGTTAATGTGAATGTGGTTAAAGGGTAGGTTTgggtattttacttttttttttttggttttcattttGTACACAGACTTTCAATAGCATTGGCTGGTTCAAATGCTTTGAGAGCAGAACTTAATAATCCCACATGTTGTACAGAATGttatatatattgcattacagtattttagcATTATTTGTTGAATAACTGAActtagaacaataaaaaaaaaaacaatcagtgaAGGTAGTTGCTAGACAAGGACAATATATACATCCAAGTCCAAGTTGAATGTTTTgtgatttttggtttttatactgtaattttcaGATGTTTCTGGAAACGTTAACAATGTTGTTCCTGTGGAATGTTGTGTTGTTCAGTAGTTGCAGTGCAAAGAATTACCTTATACCGTGCTTTAGATCAGGATTTGCTTTAGCTGTTTCTTGAtgcatgtatgtaaaatactgGCTCATTCATCTAAAGGAAATAAGGAAATGAAGGTGCATTtatgatttaataatttttttaactctcCTGTGTTCTggttgtaaaatgtattttatgttttataataatcGTTGGTATGCAGCAGAAAATTGTGCAGAAATTTCAAATTTCTTGTGTTGA
>XM_022670392.1
CACAAACAACCTGATCTGCAGCACTGCTCACATTCAGTCACTTTTACTACTGCTCAGAGgatcacacacagatacactgctctgctcacacacacttctatgTCGACTTCACAGTAGATCACTAATCCAAAATGGATTTCAAGAATGAAAATGCTGAGATAGAACTTCTTCTGGCGCACATGAACATCGGAGACATCCTCCAAGCGGTGGAACATCTCTACTCCAACAGAGAAGAGGAGGAATCGGGCGTGCTGTTCGAGGAGTGCCTGTCACAGGACGAGATGGATGAAAACGAGGAGAGTTCGGGCAGCTTGGTTTCTCATGTGCAGAATGGTGGGAAGGTCAGGTATGGGACTGTGTCTGATCTCCTGGCCTTCGTGAACATGATCTCCAACACACAAGTAGCCACACTTAAGGAACTAGGAGAAGAGTTTGGAGTTCTGCTGAACAAGGCTGACATGGTCATTAAGGAGGGGCGCTATCGCATCGACCTGGACGTGCTCCTTTTTCCATGGAGACTGACCTACAAGGCTATGGGCTCTGGCCACATTCCTAAAGGCTCTTTTGGGAAAGTACACCTGGCACAGGATATCGAAACGCGCAAGCGAATGGCATGCAAGCGGATCCCTTTGGAGCATTTCAAACCAGCAGATGTGGAGATCCAGGCACGGTTCCAGCACGAAAACATCGCTGAGCTGTATGGAGCTGTGCTGTGGGAGCAGAGCGTGCACCTCTTTATGGAGGCAGGAGAAGGCGGCTCGGTTTTGGAGAAGCTGGAGAGCTGCGGCCCAATGAGGGAGTTTGAGATCATCTGGGTCACTCAGCAGGTTCTGCGTGGCCTGGAGTACCTGCATTCACACAAAATCATACATCACGACATCAAACCCAGTAACATCGTGCTGATGTCTGACAAAGCTGTGCTGGTGGACTTTGGCCTAACTGTGCAAATGACAGAGGATGTATACATTCCTAGAGATCTAAGAGGAACTGAGATGTACATGAGTCCAGAGCTGGTCCTGTGTAGAGGCCACAACACTAAGACAGACATCTACAGCTTGGGCACCACCATTATTCACATGCAGACAGGGAGCCCACCCTGGGTCAGGAGATACCCACGCTCAGCATACCCCTCGTACCTCTACATAATCCACAAGCAGGCTCCTCCTCTGGAAGATATATCAGAGGACTGCAGCCCTGCTATGCGAGGCCTGCTGGAGCGAGCACTGGAGAAGGTCCCATCGCTGAGGAGCTCCGCCACAGAACTCCTCAACGAGGAGGCCCTCCACCCGTCTCGAGAGGACCAGCCACGCTGCTGGAGCCTGGATTCTGCACTCGGAGAGGGAACACACCCCCTCCTGCGGCAGCAGAGTCAAATGACGGACAGTACACAAGATTCCTCCTCGCTGTTCACTGAAGACTCGGGCCCGTTTAAGAGAAAAGGCTCTCTTTACGTGGACCTCGGCGCTCTGGCTGGATACTACAACTTCGTCAGGGGGCCTCCAACTACTGAATATGgctagaagatttttttttaaaggaaacctGGAGTTGCTTTGagtatatatgtacatacacgTACAGGCAAATGGGACTGAAGTTCTGAAGACGTGCACGTACGGACCTGTTTGTTGAATTAAACAGTGCACCTGTGTATCTACTCTGCTGCATGTTCACTGACACAGTCAGACTTATGCGAAGTTCCAGTGCCGGTGACAGTGCCAGTGACATTCTTAATGAGTTTAATTTGCTTGGCAATGAGCTGGAAACTACCCATGATGCAGGTGGACTTCCTGACAGCTTGGCTGAGCGATCACAGGAAAtagctctgcagtttaaactagCCAGCCTTAAAACTAGCAGTGGTGACAGGTGGTGGTAGCAGATTAATGAATGCGTTTGGTTATCATTTTTACGGAGTTTGCGTAAAGATTCAGTAAGACTTTTACTTTTTGTAACATgagcagtaaataaaataacatcaggTTATATTATTCCCATGTGAATTGACATGTGGGTAAATATTCCATCATaccatgtgtaaaaaaatatattattttacttttttctcaaTTATGAAGACATAAACAGTTCCAATCACAGTTAAACAAGTTTAATCTGCTTGGTAATAAGATAAAAACTACATATTTGATATATAGGTGAACTTTGGCTGAGCAATCACAAAAAATAGCTCTGCAAAACCAGACAGAAACAGCCCTACAGCTTTAAATATATCGTATATATTTAAGTTGGCACTGCAGATTAATCaccttctggaaaaaaaaaaaagaacttaaataaaaaaaaagaagaaggaaaagtcCCAAAAGTTTGCATGGaagaaaaaatagcattaagcACTGAGGATGTGTCACATGGCTGTATTACAGTAAACGCACTGAGATGTGCACATACATGGAAAGGATTAACTAGACTGATATGATGCAGAGCCACATCCTGCCTTCTGCGGCCCAAGATAAGCACATAATACAGGGGGAAATGGATTGTTTGTCATGTTTTGTGTCTCTCTATCAATGCAGAGTGTATGTATAATTGTGTAATGTcaatgtccaatgaaaaacatgcatattTTTTAGCGTCAATATGcaatttttgcaattttttttttctttttttatcgtGAGGCTGGGCCACCttctaaaaaatagttttaacattaatattGATTACCTACAATGATTTTATACACTaacatgccacatgtcatgggacagaacCTTGTATTATGTCCCAttactttgctttgcttttccCATataagctaaagaatgctgcacagAATTGTGGGATATGCATGGAGATGATTTCTGCTAGAGAATCTTATCTAATCGTATGGACAGTTTTAGCCAGTAGCAACATCTTGCTAAAACTCACTCAGGGTGACCTCACTATAACTCAGATAATTCAtgtcgccttgccatgagcacactggccagtgttcagcctcactcacaagataacccctcacaacttacacagtcCCATAATCAATTTGCATTCTGCTGTTCCATGGAGTCTTCATGacgtttggcatgtcagtgtaacaGTATACCATTCTGAAAATATGTTAtggtgaaaaagagagaaagttcaTGATGTGTATTCTACAGTATGTTTATCATAGTTATAGATGTTAATGTGAATGTGGTTAAAGGGTAGGTTTgggtattttacttttttttttttggttttcattttGTACACAGACTTTCAATAGCATTGGCTGGTTCAAATGCTTTGAGAGCAGAACTTAATAATCCCACATGTTGTACAGAATGttatatatattgcattacagtattttagcATTATTTGTTGAATAACTGAActtagaacaataaaaaaaaaaacaatcagtgaAGGTAGTTGCTAGACAAGGACAATATATACATCCAAGTCCAAGTTGAATGTTTTgtgatttttggtttttatactgtaattttcaGATGTTTCTGGAAACGTTAACAATGTTGTTCCTGTGGAATGTTGTGTTGTTCAGTAGTTGCAGTGCAAAGAATTACCTTATACCGTGCTTTAGATCAGGATTTGCTTTAGCTGTTTCTTGAtgcatgtatgtaaaatactgGCTCATTCATCTAAAGGAAATAAGGAAATGAAGGTGCATTtatgatttaataatttttttaactctcCTGTGTTCTggttgtaaaatgtattttatgttttataataatcGTTGGTATGCAGCAGAAAATTGTGCAGAAATTTCAAATTTCTTGTGTTGAGTTTGAGTCTGATGATAATTATATACATCAAATAAACGGTGTTAATCAAAGTA

Function

symbol description
map3k8 Predicted to enable ATP binding activity and MAP kinase kinase kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human MAP3K8 (mitogen-activated protein kinase kinase kinase 8).

NR:

description
PREDICTED: mitogen-activated protein kinase kinase kinase 8

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K04415 MAP3K8, COT; mitogen-activated protein kinase kinase kinase 8

RNA

RNA id representative length rna type GC content exon number start site end site
TU73211 False 1707 lncRNA 0.34 1 25107112 25108818
XM_022670392.1 True 3817 mRNA 0.42 8 25092562 25108871

Neighbor

gene id symbol gene type direction distance location
znf438 NA coding upstream 377329 24641088 ~ 24715233 (+)
arhgap12 arhgap12 coding upstream 629397 24364844 ~ 24463165 (+)
kif5b kif5b,LOC108430866,LOC107753262 coding upstream 735898 24331622 ~ 24356664 (+)
LOC103038196 LOC108429178 coding upstream 865728 24215123 ~ 24226834 (+)
LOC103028344 cdh18,LOC108430851,LOC107568143,LOC107654555,LOC107582195,LOC108273706 coding upstream 1139633 23754737 ~ 23952929 (+)
sncaip sncaip,LOC103399731 coding downstream 188185 25297056 ~ 25304115 (+)
snx2 snx2 coding downstream 214246 25323117 ~ 25346099 (+)
prdm6 prdm6 coding downstream 290112 25398983 ~ 25441210 (+)
nudt12 nudt12 coding downstream 414104 25522975 ~ 25531959 (+)
LOC103035659 LOC103035659,LOC108430319,LOC108265778,LOC106587031,LOC105014051 coding downstream 493530 25602401 ~ 25612117 (+)
G54281 NA non-coding upstream 138731 24950612 ~ 24953831 (+)
G54280 NA non-coding upstream 148786 24943451 ~ 24943776 (+)
G54253 NA non-coding upstream 282132 24808973 ~ 24810430 (+)
G54248 NA non-coding upstream 294129 24796334 ~ 24798433 (+)
G54244 NA non-coding upstream 310638 24781669 ~ 24781924 (+)
G54306 NA non-coding downstream 27564 25136435 ~ 25136994 (+)
G54310 NA non-coding downstream 116246 25225117 ~ 25226098 (+)
LOC111192642 NA non-coding downstream 249131 25358002 ~ 25378241 (+)
G54376 cep120,zgc:163014,LOC107712640 non-coding downstream 359183 25468054 ~ 25471996 (+)
LOC111192644 NA non-coding downstream 443671 25552542 ~ 25561370 (+)
epc1 epc1,LOC108430856 other upstream 801797 24254187 ~ 24290765 (+)
G53804 ddit4 other upstream 3170968 21919225 ~ 21921594 (+)
LOC103028037 LOC108429162,LOC107684133,LOC108273534,LOC108430697,LOC108274369 other upstream 3345482 21673574 ~ 21747080 (+)
fbxo11 fbxo11,fbxo11b,LOC108430631,LOC105896971,LOC107728720,LOC107582786,LOC107550041 other upstream 4266888 20794025 ~ 20825674 (+)
cript cript,LOC107582781,LOC107728714 other upstream 4531614 20555314 ~ 20560948 (+)
srp19 srp19 other downstream 437121 25545992 ~ 25549494 (+)
LOC103040153 cdc14b,LOC108265480 other downstream 1428181 26537052 ~ 26551570 (+)
LOC103023473 tmem230,ct030,LOC103023473,LOC106579885,LOC107713020,LOC101077900,LOC105894893,LOC107553029 other downstream 1854021 26962892 ~ 26973026 (+)
G54682 es1,LOC108430344,LOC105894898,LOC107553036,LOC107671040,LOC107713034 other downstream 1911373 27020244 ~ 27022891 (+)
G54690 tmem127,LOC107552193,LOC106579884 other downstream 1923964 27032835 ~ 27034938 (+)

Expression


Co-expression Network