G55265


Basic Information

Item Value
gene id G55265
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 28785898 ~ 28865551 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU74520
ataaccacaccttttttgaatagagctgaataacgttttaaaaaccgaattctgtggggatataaaaatttgacaatataagcagaggttacactagctgttgcatttaaataaaggaggtagaattacagtatattagaaaaaaacatgattgaaagttgtctgttttgccattgaaacctatggggatgggtggggttacacagctttctgaaaccgaacagcagggggcgcccgacctgtggtggcttcacttttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU74520 True 259 lncRNA 0.39 2 28785898 28865551

Neighbor

gene id symbol gene type direction distance location
LOC103027379 LOC108412053,LOC108264941 coding downstream 15904 28767056 ~ 28769994 (-)
hps4 LOC102793116 coding downstream 19427 28752231 ~ 28766471 (-)
LOC103028225 NA coding downstream 35067 28744353 ~ 28750831 (-)
hnf1a LOC108412048,LOC107687971 coding downstream 44075 28733294 ~ 28741823 (-)
LOC103032242 NA coding downstream 238691 28538022 ~ 28547207 (-)
LOC111192730 NA coding upstream 16328 28881879 ~ 28884887 (-)
lzts1 lzts1 coding upstream 35997 28901548 ~ 28955223 (-)
LOC103024952 LOC108412520 coding upstream 355004 29220555 ~ 29388554 (-)
LOC111192660 NA coding upstream 784877 29650428 ~ 29652090 (-)
LOC103024435 NA coding upstream 804816 29670367 ~ 29702656 (-)
G55253 NA non-coding downstream 57914 28727612 ~ 28727984 (-)
G55251 NA non-coding downstream 69897 28715239 ~ 28716001 (-)
G55249 NA non-coding downstream 81671 28703622 ~ 28704227 (-)
G55204 NA non-coding downstream 116751 28668940 ~ 28669147 (-)
G55196 NA non-coding downstream 167521 28617767 ~ 28618377 (-)
G55281 NA non-coding upstream 7147 28872698 ~ 28872989 (-)
G55299 NA non-coding upstream 26724 28892275 ~ 28895538 (-)
G55315 NA non-coding upstream 121219 28986770 ~ 28987328 (-)
G55317 NA non-coding upstream 165536 29031087 ~ 29031325 (-)
G55320 NA non-coding upstream 302416 29167967 ~ 29168282 (-)
LOC103031600 lrrc75ba,LOC108414797,LOC107753104,LOC107712478,LOC105891565 other downstream 185388 28554727 ~ 28600510 (-)
LOC111192657 NA other downstream 361943 28417733 ~ 28423955 (-)
G55023 cunh5orf51,clg13h5orf51,LOC103038767,LOC107667559,LOC107686395,LOC106585203 other downstream 628449 28153421 ~ 28157449 (-)
LOC103039900 NA other downstream 742647 28026739 ~ 28043251 (-)
G54947 NA other downstream 1054819 27728711 ~ 27731079 (-)
kiaa1671 NA other upstream 878477 29744028 ~ 29840753 (-)
LOC103046862 LOC108410878 other upstream 1030964 29896515 ~ 29934430 (-)
LOC103027498 LOC108411246,LOC106585447 other upstream 2769930 31635481 ~ 31690808 (-)
LOC103043418 arpc5la,arpc5l,LOC108411248,LOC107571143,LOC108265305,LOC107550963,LOC107753090,LOC107676626 other upstream 2865913 31731464 ~ 31740221 (-)
LOC103021360 LOC108440818,LOC107659619,LOC108265551,LOC107726210,LOC107553829,LOC107684495 other upstream 3906476 32772027 ~ 32802160 (-)

Expression


Co-expression Network