G55317


Basic Information

Item Value
gene id G55317
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 29031087 ~ 29031325 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU74583
gcttccctctgtctTCCAAGCTGatccggactccatttcccagaatgtcACTGACACTCCTGATCATCATCACATGACCCTCACTCAGTCTTAGTCACCTGACCTATTAATTGTTTTCACCTGCTAATCTGTCTATATATACCCTCTCCTTTGTTCAGTTCCTTGCCAAGTTTTGACTAGCCACATAGCATTACTAGCATTCCTGTCGCTCTTGTTAGATTTTTCGGGTATGACCTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU74583 True 239 lncRNA 0.44 1 29031087 29031325

Neighbor

gene id symbol gene type direction distance location
lzts1 lzts1 coding downstream 75864 28901548 ~ 28955223 (-)
LOC111192730 NA coding downstream 146200 28881879 ~ 28884887 (-)
msi1 msi1,LOC107687968 coding downstream 172927 28827738 ~ 28858160 (-)
tmem233 LOC107687986 coding downstream 217176 28806678 ~ 28813911 (-)
LOC103026611 prkab1,prkab1b,LOC108412051,LOC107554438,LOC107753114,LOC107687987,LOC107703154 coding downstream 227386 28794816 ~ 28803701 (-)
LOC103024952 LOC108412520 coding upstream 189230 29220555 ~ 29388554 (-)
LOC111192660 NA coding upstream 619103 29650428 ~ 29652090 (-)
LOC103024435 NA coding upstream 639042 29670367 ~ 29702656 (-)
LOC103023912 LOC108410873 coding upstream 700113 29731438 ~ 29738545 (-)
LOC103023281 NA coding upstream 717521 29748846 ~ 29756606 (-)
G55315 NA non-coding downstream 43759 28986770 ~ 28987328 (-)
G55299 NA non-coding downstream 135549 28892275 ~ 28895538 (-)
G55281 NA non-coding downstream 158098 28872698 ~ 28872989 (-)
G55265 NA non-coding downstream 165536 28785898 ~ 28865551 (-)
G55267 NA non-coding downstream 238221 28792155 ~ 28792866 (-)
G55320 NA non-coding upstream 136642 29167967 ~ 29168282 (-)
G55332 NA non-coding upstream 419763 29451088 ~ 29451356 (-)
G55336 NA non-coding upstream 493328 29524653 ~ 29525127 (-)
G55387 NA non-coding upstream 614719 29646044 ~ 29727767 (-)
G55433 NA non-coding upstream 812110 29843435 ~ 29844402 (-)
LOC103031600 lrrc75ba,LOC108414797,LOC107753104,LOC107712478,LOC105891565 other downstream 430577 28554727 ~ 28600510 (-)
LOC111192657 NA other downstream 607132 28417733 ~ 28423955 (-)
G55023 cunh5orf51,clg13h5orf51,LOC103038767,LOC107667559,LOC107686395,LOC106585203 other downstream 873638 28153421 ~ 28157449 (-)
LOC103039900 NA other downstream 987836 28026739 ~ 28043251 (-)
G54947 NA other downstream 1300008 27728711 ~ 27731079 (-)
kiaa1671 NA other upstream 712703 29744028 ~ 29840753 (-)
LOC103046862 LOC108410878 other upstream 865190 29896515 ~ 29934430 (-)
LOC103027498 LOC108411246,LOC106585447 other upstream 2604156 31635481 ~ 31690808 (-)
LOC103043418 arpc5la,arpc5l,LOC108411248,LOC107571143,LOC108265305,LOC107550963,LOC107753090,LOC107676626 other upstream 2700139 31731464 ~ 31740221 (-)
LOC103021360 LOC108440818,LOC107659619,LOC108265551,LOC107726210,LOC107553829,LOC107684495 other upstream 3740702 32772027 ~ 32802160 (-)

Expression


Co-expression Network