G55324


Basic Information

Item Value
gene id G55324
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 29232502 ~ 29251704 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU74592
cagcaaggcGTGCACctacaatttgtcctcttttgaactctggtatgtcacccataatgttgtgtgaattgcaatattttgagcaaaactgtgctcttaccctgctaattgaaccttcacactctgctcttactggtgcaatgtgcaattaatgaagattggccaccaggctgctccaatttagccatgaaacctcccacactaaaatgacaggtgtttcagtttcattgtccaacccctgtatgtaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU74592 True 249 lncRNA 0.43 2 29232502 29251704

Neighbor

gene id symbol gene type direction distance location
LOC103025277 LOC108413761 coding upstream 342124 28886470 ~ 28890378 (+)
LOC103028136 NA coding upstream 437843 28790400 ~ 28794659 (+)
LOC103026907 NA coding upstream 445119 28775630 ~ 28787383 (+)
c6h12orf43 NA coding upstream 499081 28729414 ~ 28733421 (+)
unc119b unc119b,unc119.1,LOC107753165,LOC107712459,LOC107550938,LOC107687994 coding upstream 504495 28716975 ~ 28728007 (+)
crybb2 crybb2,LOC108265494,LOC108410876,LOC108234953 coding downstream 491445 29743149 ~ 29747471 (+)
lsm1 lsm1,LOC107571959,LOC107548281 coding downstream 712370 29964074 ~ 29966667 (+)
LOC103046047 LOC107756834,LOC107548280,LOC107691567,LOC107702864 coding downstream 717046 29968750 ~ 30061365 (+)
star star,LOC107691570 coding downstream 812636 30064340 ~ 30068306 (+)
elmod3 elmod3,LOC107702863,LOC107756833,LOC107722433,LOC107571955 coding downstream 821015 30072719 ~ 30089265 (+)
G55284 NA non-coding upstream 356260 28876010 ~ 28876242 (+)
G55282 NA non-coding upstream 358411 28873740 ~ 28874091 (+)
G55236 NA non-coding upstream 402790 28827885 ~ 28829712 (+)
G55235 NA non-coding upstream 406859 28824191 ~ 28825643 (+)
G55232 NA non-coding upstream 425038 28805706 ~ 28807464 (+)
G55334 NA non-coding downstream 271534 29523238 ~ 29523514 (+)
G55359 NA non-coding downstream 475384 29727088 ~ 29738539 (+)
G55377 NA non-coding downstream 539516 29791220 ~ 29793866 (+)
G55411 NA non-coding downstream 591715 29843419 ~ 29844321 (+)
G55416 NA non-coding downstream 644856 29896560 ~ 29901380 (+)
G55218 NA other upstream 477685 28754030 ~ 28754817 (+)
asphd2 asphd2,LOC107687974,LOC107703165 other upstream 575684 28646064 ~ 28656818 (+)
ipo11 ipo11 other upstream 1294113 27814215 ~ 27938389 (+)
G54841 NA other upstream 1519924 27703772 ~ 27712578 (+)
LOC107197454 NA other upstream 1563840 27663782 ~ 27668662 (+)
G55502 NA other downstream 1095312 30347016 ~ 30625046 (+)
G55532 cgnl1 other downstream 1277158 30528862 ~ 30550061 (+)
G55831 LOC107691557,LOC108411168 other downstream 2669116 31920820 ~ 31924095 (+)
G55844 adam9,LOC107591921,LOC107702867,LOC107722987 other downstream 2722977 31974681 ~ 31977419 (+)
LOC103024127 kcnip3a,LOC108440810,LOC107753121,LOC107687962,LOC107684506,LOC107566017,LOC108264878,LOC101482209,LOC107553838 other downstream 2807705 32059409 ~ 32150570 (+)

Expression


Co-expression Network