G89650


Basic Information

Item Value
gene id G89650
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000015
NCBI id null
chromosome length 8631711
location 4054473 ~ 4054679 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU102037
AGCAGATCTAGGCAGGTGGAGCTGGTGGAGGTGGAGGGGTTCAGAGGTACTCTGATAGTTCACTGCAGGACTAGATTACAACAAACACTGAACCTGACTATTTAAATGTTGAACAAGCAATCTCATTAGCTGCAGGATCAGCAGAGGCCAATCAGCTTGTGTCATGGAATATTGTAAACAAAAAAACAAAACAAAAACAAAACAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102037 True 207 lncRNA 0.41 1 4054473 4054679

Neighbor

gene id symbol gene type direction distance location
CI01000015_03872971_03904497 RNF123 coding upstream 149812 3872971 ~ 3904661 (+)
CI01000015_03858281_03868648 RNF123 coding upstream 185825 3858281 ~ 3868648 (+)
CI01000015_03852286_03855347 NA coding upstream 198932 3852238 ~ 3855541 (+)
CI01000015_03826245_03844971 ELAVL2 coding upstream 209083 3826245 ~ 3845390 (+)
CI01000015_03733443_03765495 MARK1 coding upstream 288965 3733443 ~ 3765508 (+)
CI01000015_04101282_04101626 NA coding downstream 46006 4100685 ~ 4101675 (+)
CI01000015_04352229_04502732 GRM7 coding downstream 297550 4352229 ~ 4502732 (+)
CI01000015_04572432_04575642 NA coding downstream 517753 4572432 ~ 4576978 (+)
CI01000015_04738933_04739438 NA coding downstream 683508 4738187 ~ 4740392 (+)
CI01000015_05107856_05112960 NA coding downstream 1052150 5106829 ~ 5113092 (+)
G89637 NA non-coding upstream 5941 4048061 ~ 4048532 (+)
G89638 NA non-coding upstream 8049 4044142 ~ 4046424 (+)
G89631 NA non-coding upstream 18475 4035765 ~ 4035998 (+)
G88926 NA non-coding upstream 94821 3954208 ~ 3959652 (+)
G88939 NA non-coding upstream 207249 3847015 ~ 3847224 (+)
G89671 NA non-coding downstream 20484 4075163 ~ 4075656 (+)
G89675 NA non-coding downstream 26690 4081369 ~ 4081605 (+)
G89714 NA non-coding downstream 71570 4126249 ~ 4126639 (+)
G89719 NA non-coding downstream 76427 4131106 ~ 4131388 (+)
G89726 NA non-coding downstream 83327 4138006 ~ 4138261 (+)
CI01000015_03011472_03026518 NA other upstream 1024183 3011472 ~ 3026636 (+)
CI01000015_02512276_02523824 NA other upstream 1538044 2511546 ~ 2524572 (+)
G88172 NA other upstream 1553879 2384016 ~ 2526510 (+)
G87972 NA other upstream 2177879 1876004 ~ 1876594 (+)
G87432 NA other upstream 2443086 1611083 ~ 1611387 (+)
G89822 NA other downstream 237167 4291846 ~ 4314351 (+)
G90622 NA other downstream 1159617 5203697 ~ 5400121 (+)
CI01000015_05409997_05413784 NA other downstream 1353687 5409997 ~ 5413845 (+)
G90777 NA other downstream 1849415 5744146 ~ 5907461 (+)
CI01000015_06054566_06083712 NA other downstream 2009103 6054452 ~ 6083969 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G90535 NA non-coding NC_056711.1 CM032080.1 3713924 ~ 3714846 (-)