LOC103037863 (adra2b,LOC108440671,LOC108264887,LOC107554404,LOC107753091)


Basic Information

Item Value
gene id LOC103037863
gene name adra2b,LOC108440671,LOC108264887,LOC107554404,LOC107753091
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 33635152 ~ 33640077 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU75870
ATATTTAAAATTGttgtgtacaaaaaaaaaatcctcgaACTTTTAAAGGCTATAACTGGTATATACATACAGTCATTTTACAGAAAAGTCTTAAACgattgttacctgacctgaatgCATCTGTttgggttttacagtgttgGAATGTTGCGTTTGGACTGCACTTTTCCAAAGCTTTGCAAAGTTTCATGATCCAGATCCGAATGGGTTCCTCCTTTCTTAGTGTTGTCTGgattgctcttttttttctccactatTTGAAAAATAAAGCCACTGAAAT
>XM_007234208.2
acacacactgaacagagGAGCAGAAGAAACACcgaggagagagaaacagacggactaaaataaaaaagaaagagaaaaagtgagagagaagccTGCCCGGACTCCTGCCCCACTCAACACTCTGCACTGCCCGGCACGCGCGCTTTCTGATGCACGTTTCTACACGGGAATATTCAGCACAACCAACTCTTTACCTGCAGCTTTATCAACCAGGCACTTTGGGTACTTCAaactcttttaattatttatgtttccagggaaattgctttttttcttgttagtatttttctgttttaggtTTTGCACAAATTTGGCAACTCCCCCCAAActtttaaaatcatgattttagcTTGTTTGTTACTAGCTCGTGTTTAGACGCAAGTTGTTTTAAAGTTAAAGCATAAGGACTAAGGAAATGACAGCTGAGACTTTTGTTAATCCCTTAATAGGActataatttgtttaattagatCTATTTTTACAAGTAAGTCCCCAATTACACGCCCCCAGTTTACACAACAAATTCAGCTGCTAACATAAACAACCCAGATTTGAAATTTGAATCCAATTTTCTGGACAAAATAGCTTCAAGCGAGACGGATGTGTCAGCCTGTTTAGCCGTATAAGCTGAACAGTGTTGATCCATATCTGGGAGTATTTTTAGGCGTGTGGAGGAAGAGCATGGACTTAAAGAGAGGACAGGGGAGGCAGGAAGAAGCCCAGTCTTTGCAAGATGAATGCATCTAACCAAGGCTTCGGACAGCTGTGCTTCAGGGGGGTTTATATAGTCTGTTGTTGTGTGCAGACTTGACTCGACTAGATCGTTTACCCAGAAAGGACCTTTCCCAGAATCAATTCCCCTGGTTGAAAAGGGACAGCAGAGATTCAGCACACTTTGATTCGGCGGCAAAACAGGGCAGTGGCAGTCATGGAGAGTGCGTGTGCTATTCAAGAGGATCTTTCCAACATTAACAGCAGCAATCCTGGGGCTAACTCCCTCCCTTTGGTCAACCGGAGCATAAAACTCCCCCCGTACTCACCTGAAGCAACGGCAGCCTTCGCCACAGCCATCACGCTCATGATCGTCTTCACCATTGTGGGCAACATCTTGGTCATTATTGCTGTGTTGACCAGTCGGTCCCTAAGGGGCCCCCAAAACCTCTTCCTGGTGTCTCTGGCAGCAGCTGATATCCTGGTGGCCACCTTGATCATCCCGTTCTCACTGGCCAACGAGTTGATGGGCTTCTGGTACTTCAAATCAGTGTGGTGCGAGATCTACCTGGCCCTGGATGTCTTGTTCTGCACGTCCTCCATCGTGCACCTTTGTGCCATCAGTCTGGACCGCTACTTGTCCATTTCCCGGGCTGTGACATACGGAGCCCAGAGGACGCCCCGCCGCATCAAGTGTGCCATCTTGATCGTCTGGCTGATTTCGGCAGTCATCTCCTTTCCACCACTCCTGTCCATGAACAAGAAAAAGGGGACAGATGAGGCAGGGTGTCCACAGTGTGAGCTGAACAATGAACGTTGGTACATCCTTTATTCCACCATTGGCTCCTTCTTCGCTCCCTGCCTGATCATGATTCTGGTCTACATGCGGATTTACCAAATCGCCAAGCAGCGCACGAGGTGCCCTCCAGGGGAGCCGAGGAAGGAAATCCCTGCCAGTGCAGCCACCCCTCAGCACAAACCAAGGGCTCTTCAGAATGGTAGAGGAGATGGTGCAAGTACTCCTGGCACCCCTCAGGCAAAACCAGCTATGCCCAGACCTCCAACTCTCGCTGTACCTCAAGCGGAGTCTACGCAtacagagaagcagcagccagcAACTACCCCAACCACCAACAACCTTCTGCCCCCTCCTTCGCTTGGTACAGCATTGACTCCTGTTTCACCCTGTTCTCCTCCAGGaccttctccatctctctcacccTCCATCTCCTCCATCCAGAAGCAAGACTCCCAGCTCCCTGCTCCCAGTAAACCCAGCAggtggaagaaagagaaaaagccTGACAAGAAGCCTGACAACAACAATGGAGAAAGCTCAACATCTGATTCTGACACTGAGCAGGGAGGGGTGGGAACAGAGATGCCCATGACGCCCAGTGGTGAGCCCAGTGCTGGCATCCACTCACCTGCAACCATCCAGAAATACAGAGACATGATTGCCACAGCAAAAGGCACCAGGCTGGCTTCTCGGAAGTCCAAGCAAGATGGAACACCCAACTCAGCCCGGCGCAAGGCCATGGTGAACAGGGAGAAGCGCTTCACCTTTGTGTTGGCAGTTGTCATTGGCGTGTTTGTCGTCTGTTGGtttcctttcttcttctccTACAGCCTGCAAGCGGTGTGCCCTAGGACCTGTAACCTCCCAGAGCCCCTCTTTAAATTCTTCTTCTGGATTGGCTACTGCAATAGTTGCCTCAACCCTGTCATCTACACCATCTTCAACAAGGATTTCCGCAGAGCATTCAAGAAAATACTCTGCAAAAACACCAAGGGTACATTCTTCTGACTGACCGAATGTCTCAGATAGGCAACTGACGGAGGTACAAGAACCTGGAAAACTGTGTACTGTACGATTTTTACAAAGCACAATGACTTcattttaacagtgtaaataaGGGGCTTTTTGTTTGGCCCTGCAAATCAAGAACAGCATGCAATGACAAAGCACATTTTCATGTGTGTCAAATGACAGTGACGTACCTTTTTATGGGGGCAAATTCCTCAGAATATGGATTTCTGGACTTTTTGCAACATAGTTTTGCAACATACTAGGACTCATCAAAAACCAGACGCACAGTAGAGAAAGAGTGAGCGAGGGAGATCTCAGCGGGACCACAAAAGCCAGAAACTGTCCTGTTTTATGGAGGTTATCGTGCACCTGTGAGGATAACGAAGTAAAGGGAACACAATGTAATAGTGTTTTCCCTTTTTTGCGCCTTTCTAAGAATATCTGCCCTCAGGGATAGCACAAGCATGGGTTTCTGTAGGGATTTCAATCCAGCCAGAGTCTTATtttatccccacagaattatcCCTCAAACATTACAAAGACACAAATACACAGATCCTCTTCACTGATACTTGGTGAGCTTTAATTCTAGCGAAGGAAACAGGGGGATGGAAAATGCCCTTGCGACGCACATTGCCGGGGGCCATGCGTATCGAATGAATAGATGTTGGAGCCTAAAAGCTTTTGGATTCAGATGGCACCAGTGGGGGAAGATTCCCCTGCCATGCCCATCTTCTCTCCCCTCCTAATGCAAGCATGCTTACTGAATACAAAGCACCAACCGTGAGGAAAGACTTCTTCCGTGAGGAAAAGCTTCTTTGTCTATCTTACTCCAGCAGGTTATCTGGGCTGACGGACGCTCAGCCTGCTTAGTAATCTCGCGAATGTGGATGCAACTGCTTTGAGGTAGAAGTtaaggaccaaaaaaaaagaaaaactgaacaTGGAAAAACTTGTCATGGACACAGCTTTTGAGAATCTGTTCCTAAACTGGCCCCTAAGACTGATCTTGACTGTGTTCTTAAAGATGCAACCATAGCAAAGGTGTTACTAACTGTGGTGACCAGTGAATCAGGGCAATAAGGACCCTTTCTAATATATCTGGaattgttggtttgttttgggattttttttttttttgggttcacttttcacttttctctaaaaaaaaaaaaagaacttgagATTTCTGCCATAAACTAAAATACTATTGCACCCTGTAAACTGTTAATCGTTCAGCAGGGTGATACTTTGGGACTAAGGGCTGATGGCAATGACACTTCCTATTTCATTCTCTGGTCGCTGTCACTTATTTGATGAttgttgtgtgtgagagagtgtgtatgatgaacgtgtctgtgtgtgtgtgtgtgtgtgtgtgagagaaaactGCACTTATTAACTGACTGAGCGAGTGTTGTGTGCGACTGACTCATGCGCGAATGCCGATGTGTGCTGCGGATGACAGAGTGTGCGTATGGGCAGGCATTGTACGGGgaggtttattattattatttttttgttttttttctgcggTATATCTTTCGGCCCGTGCAGTGCAGAGACCCATCATCCCCCTCCCCATTTCCCACTTCACTGGCAGTAAATGAGTAAATGGACactatgtgtttgagtaaaacaaagGTCGGCATGCCTTCTCTCTGCCAGCTCATGCCAATGCCTTTAATCCAGCTCCTTCTTGTGCCAATGCTGTTCCATGTGTGGCTGCTAAACCGTGTCTTCTTATACAAACAGTacagaataatgttttaatggttttaGGCCCAGTGATCTTATGTTTTTGGTGAATGTGCAGGTTCAGACACGGTTCGGTTGTTAGGCCTTTGGAGATTAAAGGTTTAAAGGTTAGCGGGTCGAAATGTTGTAACAATGTCGAGACAATGTTGAGAGCTGTGAACAATTGAGCAATTTTGGTTttgtactatttatttattatttgcctgtttctgtttttgcccatatatatacatatttattaacgCCAGTTtgttatcatgcattctttgtttctttgtttgtaagTTGATGCTGGGGATGCGAGGAGGAGGGGAGGGGTTGGGGGTTGGAGCAGGAGATGGGGCGGGGCTAAAATCCAAATTGCATATTTAAAATTGttgtgtacaaaaaaaaaatcctcgaACTTTTAAAGGCTATAACTGGTATATACATACAGTCATTTTACAGAAAAGTCTTAAACgattgttacctgacctgaatgCATCTGTttgggttttacagtgttgGAATGTTGCGTTTGGACTGCACTTTTCCAAAGCTTTGCAAAGTTTCATGATCCAGATCCGAATGGGTTCCTCCTTTCTTAGTGTTGTCTGgattgctcttttttttctccactatTTGAAAAATAAAGCCACTGAAATATG

Function

symbol description
adra2b Enables alpha2-adrenergic receptor activity. Involved in adenylate cyclase-inhibiting adrenergic receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of plasma membrane. Is expressed in several structures, including digestive system; eye; heart; integument; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in diabetic neuropathy; hypertension; myocardial infarction; obesity; and type 2 diabetes mellitus. Orthologous to human ADRA2B (adrenoceptor alpha 2B).

NR:

description
PREDICTED: alpha-2B adrenergic receptor-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0065008 regulation of biological quality biological_process
GO:0044057 regulation of system process biological_process
GO:0016020 membrane cellular_component
GO:0004935 adrenergic receptor activity molecular_function

KEGG:

id description
K04139 ADRA2B; adrenergic receptor alpha-2B

RNA

RNA id representative length rna type GC content exon number start site end site
TU75870 False 280 lncRNA 0.34 1 33639795 33640074
XM_007234208.2 True 4926 mRNA 0.46 1 33635152 33640077

Neighbor

gene id symbol gene type direction distance location
LOC103038175 dusp2,LOC108440670 coding upstream 10400 33619314 ~ 33624752 (+)
LOC103039216 LOC108440668 coding upstream 114649 33511511 ~ 33520503 (+)
gck gck,LOC107550933 coding upstream 125778 33503615 ~ 33509374 (+)
LOC103024594 NA coding upstream 256539 33376019 ~ 33378613 (+)
LOC103026160 NA coding upstream 275009 33328786 ~ 33360143 (+)
nr6a1 nr6a1,nr6a1a,LOC107698081,LOC107721088,LOC107753334,LOC107563838 coding downstream 706516 34346593 ~ 34377925 (+)
LOC103026546 LOC108266031,LOC107563852 coding downstream 769271 34409348 ~ 34431835 (+)
LOC103024866 tubb2b,tubb4b,LOC103024866,LOC101061694,LOC105901187 coding downstream 890223 34530300 ~ 34533334 (+)
LOC103022994 LOC108426650 coding downstream 999739 34639816 ~ 34665998 (+)
LOC103022237 ube2d4,UBE2D4,LOC101482088,LOC101172587,LOC108236573,LOC107393720 coding downstream 1208002 34848079 ~ 34870296 (+)
G56235 NA non-coding upstream 25895 33608695 ~ 33609257 (+)
G56213 NA non-coding upstream 101195 33523103 ~ 33533957 (+)
G56203 NA non-coding upstream 151879 33480910 ~ 33483273 (+)
G56201 NA non-coding upstream 169035 33462410 ~ 33466117 (+)
G56159 NA non-coding upstream 285522 33349215 ~ 33349630 (+)
G56278 NA non-coding downstream 2136 33642213 ~ 33642422 (+)
G56283 NA non-coding downstream 86841 33726918 ~ 33727139 (+)
G56289 NA non-coding downstream 110825 33750902 ~ 33756692 (+)
G56305 NA non-coding downstream 145306 33785383 ~ 33785661 (+)
G56346 NA non-coding downstream 823397 34463474 ~ 34502982 (+)
izumo1 NA other upstream 39334 33564828 ~ 33595818 (+)
G56193 aplnra,LOC108441910,LOC107753098,LOC107712463,LOC107550977,LOC107703172,LOC107554406,LOC107687998 other upstream 228502 33404574 ~ 33406650 (+)
G56160 NA other upstream 269140 33358214 ~ 33366012 (+)
slc23a2 slc23a2,LOC108440813,LOC108265605,LOC107684505,LOC107753122,LOC100702287 other upstream 1417741 32183077 ~ 32217411 (+)
LOC103024127 kcnip3a,LOC108440810,LOC107753121,LOC107687962,LOC107684506,LOC107566017,LOC108264878,LOC101482209,LOC107553838 other upstream 1484582 32059409 ~ 32150570 (+)
fgf17 fgf17,LOC103025711,LOC107698084,LOC107678395,LOC107721084 other downstream 863037 34503114 ~ 34511684 (+)
G56414 tcf7l1,LOC107721095,LOC107556226 other downstream 1073141 34713218 ~ 34751563 (+)
LOC103047498 NA other downstream 1321723 34961800 ~ 34989285 (+)
ikbkb ikbkb,vdac3,LOC107560056,LOC107671013,LOC107754399 other downstream 1586408 35226485 ~ 35272528 (+)
LOC103032256 dynll1,LOC103397138,LOC107554284,LOC107559583,LOC100698873 other downstream 1636002 35276079 ~ 35284271 (+)

Expression


Co-expression Network