G56507


Basic Information

Item Value
gene id G56507
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 34709246 ~ 34710923 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU76219
ttctatgtaaagCTGTTGCTGTCTTAGGCCAGTTCActtatatatactgtaccttCCCAGACATGGCAAATTCAGGTCTAGAAAATTAAAATGCATCCAGCTGAGCTGTCTAGGCAGTTGGAGCAAATTTATATAGAGAATTTGTACTTAGCCTAAATTTACTTCTCTTTGCCACCTTTTTAACCTTCTATCAGCACTAATGAAAGCTCACTTTGCATGGCTGTGTCCCTATACTAACCTACTGTCCCCTCCCCACACCCTACCCTGACACGCAGCCTACGAAGTGCAGTGCTAGCACAGGCAGGTACGGCCGAATCACCCTCACTTCACCTCCATCAGCTCCTCCATCGTCAGGCTGAGACTGCAGAGTCTCTTACCC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU76219 True 379 lncRNA 0.46 2 34709246 34710923

Neighbor

gene id symbol gene type direction distance location
tgoln2 LOC108426653 coding downstream 23130 34677456 ~ 34686116 (-)
stambp stambp,LOC108426652 coding downstream 33766 34666351 ~ 34675480 (-)
LOC103022681 NA coding downstream 69443 34631304 ~ 34639803 (-)
LOC103024249 LOC108426649 coding downstream 92125 34601412 ~ 34617121 (-)
LOC103024553 si:dkey-90l8.3,LOC103024553,LOC108426648,LOC107698086,LOC107714563,LOC107556214,LOC107563853,LOC108264996,LOC105889949 coding downstream 122384 34578817 ~ 34586862 (-)
LOC103027077 NA coding upstream 221763 34932686 ~ 34939352 (-)
LOC103046374 cox5b,LOC103046374,LOC107602047,LOC108426657,LOC106567989,LOC106563057,LOC107558099 coding upstream 275150 34986073 ~ 34989263 (-)
serpind1 serpind1,LOC107738496,LOC107698014,LOC107560052,LOC107671000,LOC107722856,LOC107559590 coding upstream 344678 35055601 ~ 35060999 (-)
LOC103038635 slc25a1b,slc25a1,LOC108412497,LOC107754397,LOC107657208,LOC107722854,LOC107670994,LOC105898475 coding upstream 404587 35115510 ~ 35130946 (-)
LOC103043388 LOC108412499,LOC107559593,LOC107754396 coding upstream 424828 35135751 ~ 35175961 (-)
G56349 NA non-coding downstream 288045 34408840 ~ 34421201 (-)
G56336 NA non-coding downstream 305728 34397594 ~ 34403518 (-)
G56332 NA non-coding downstream 329435 34346112 ~ 34379811 (-)
G56333 nr6a1,nr6a1a,LOC107721088,LOC107698081,LOC107753334,LOC107678448 non-coding downstream 343895 34346316 ~ 34365351 (-)
G56326 NA non-coding downstream 379717 34328735 ~ 34329529 (-)
G56512 NA non-coding upstream 163641 34874564 ~ 34876645 (-)
G56519 NA non-coding upstream 202323 34913246 ~ 34913968 (-)
G56532 NA non-coding upstream 260326 34971249 ~ 34991135 (-)
G56548 NA non-coding upstream 325012 35035935 ~ 35036274 (-)
G56562 NA non-coding upstream 360393 35071316 ~ 35071759 (-)
LOC103023237 NA other downstream 1531596 33149074 ~ 33177650 (-)
LOC103021360 LOC108440818,LOC107659619,LOC108265551,LOC107726210,LOC107553829,LOC107684495 other downstream 1907086 32772027 ~ 32802160 (-)
LOC103043418 arpc5la,arpc5l,LOC108411248,LOC107571143,LOC108265305,LOC107550963,LOC107753090,LOC107676626 other downstream 2969025 31731464 ~ 31740221 (-)
LOC103027498 LOC108411246,LOC106585447 other downstream 3018438 31635481 ~ 31690808 (-)
LOC103046862 LOC108410878 other downstream 4774816 29896515 ~ 29934430 (-)
LOC103038119 LOC108412501,LOC107754395,LOC107671045 other upstream 379807 35090730 ~ 35108420 (-)
acaa2 acaa2,LOC107671002 other upstream 574499 35285422 ~ 35293421 (-)
c6h22orf39 NA other upstream 585418 35296341 ~ 35299750 (-)
LOC103038782 slc25a25a,LOC108430373,LOC107754405,LOC107671014,LOC107699669,LOC107560063,LOC107559565,LOC107752985 other upstream 611062 35321985 ~ 35332434 (-)
G56638 NA other upstream 709907 35420830 ~ 35458874 (-)

Expression


Co-expression Network