G57001


Basic Information

Item Value
gene id G57001
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 36298059 ~ 36341036 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU76904
ttctttgattttaccaaattaaaaacctctggaatataatcaagaggaagatggatgatcacaaaccatcaaaccaccaaactgaactgcttaaatttttgcaccaggagtaaagcagcataaagttatccaaaagcagtgtgtaagactggtggaggagaacatgatgccaagatgcataaaaaaactgattaaaaaccaaccaggattattccaccaaatattgatttctgaactcttaaaactttatgaatatgaactt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU76904 True 262 lncRNA 0.34 3 36298059 36341036

Neighbor

gene id symbol gene type direction distance location
c6h9orf116 LOC103023176 coding downstream 88400 36208216 ~ 36209659 (-)
LOC103036273 pip5k1bb,LOC108412809,LOC108265367,LOC105901155,LOC107664977,LOC106585038 coding downstream 227064 36016893 ~ 36070995 (-)
pola2 pola2,LOC107710902 coding downstream 333898 35956103 ~ 35964161 (-)
LOC111192675 LOC107754426,LOC107670998,LOC107699638,LOC107560048,LOC107753005,LOC105014160 coding downstream 902815 35390808 ~ 35395244 (-)
LOC111192733 NA coding downstream 927099 35367649 ~ 35370960 (-)
LOC103035014 rapgef1,rapgef1a,LOC108265900,LOC107557186,LOC107598978 coding upstream 3566 36344602 ~ 36385497 (-)
med27 med27,LOC107665006,LOC107557205,LOC107725311,LOC107757301 coding upstream 71836 36412872 ~ 36492714 (-)
LOC103045855 LOC108438352,LOC108265896 coding upstream 264371 36605407 ~ 36641563 (-)
LOC103045561 phf19,LOC107557185,LOC107599052,LOC106585785 coding upstream 414130 36755166 ~ 36778310 (-)
LOC103045252 LOC108438351 coding upstream 455694 36796730 ~ 36818211 (-)
G56982 NA non-coding downstream 64713 36231079 ~ 36233346 (-)
G56966 NA non-coding downstream 73049 36221459 ~ 36225010 (-)
G56967 NA non-coding downstream 76852 36219881 ~ 36221207 (-)
G56946 NA non-coding downstream 200062 36079787 ~ 36097997 (-)
G56940 NA non-coding downstream 229898 36050378 ~ 36068161 (-)
G57013 NA non-coding upstream 67139 36408175 ~ 36408452 (-)
G57010 NA non-coding upstream 70199 36411235 ~ 36412749 (-)
G57012 NA non-coding upstream 259002 36600038 ~ 36603428 (-)
G57043 NA non-coding upstream 484731 36825767 ~ 36839252 (-)
G57107 NA non-coding upstream 702291 37043327 ~ 37058088 (-)
LOC103023491 fnbp1,LOC107599022,LOC108264955 other downstream 36514 36226129 ~ 36261545 (-)
unc45b unc45b other downstream 290072 35993525 ~ 36007987 (-)
LOC103036583 zgc:103670,LOC108412807,LOC107725322,LOC107598984,LOC107698990,LOC107720814,LOC107557201,LOC108265363 other downstream 305557 35971730 ~ 35992502 (-)
mrps36 mrps36 other downstream 350237 35928480 ~ 35947822 (-)
bicdl1 bicdl1,nfkb1,LOC107553048,LOC107724381 other downstream 430975 35831212 ~ 35867084 (-)
G57014 NA other upstream 61814 36402850 ~ 36403298 (-)
LOC107196826 LOC108438352,LOC106580127,LOC108265896,LOC106585786 other upstream 339130 36680166 ~ 36746634 (-)
LOC111192678 phf19 other upstream 444272 36785308 ~ 36792444 (-)
brpf3 brpf3,LOC108265695 other upstream 940077 37281113 ~ 37299607 (-)
LOC103043112 LOC108438563,LOC108265696,LOC107725303,LOC107653398,LOC107598961,LOC107674288,LOC107734522,LOC107570980,LOC105889772 other upstream 961011 37302047 ~ 37326736 (-)

Expression


Co-expression Network