G57066


Basic Information

Item Value
gene id G57066
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 37005273 ~ 37005798 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU76991
aaacacctgtcattttagtgtgggattttaggtttcatggctaaactggagcagcctggtggtcaatcttcattaattgcacattgcaccagtaagagcagagtgtgaaggttcaattagcagggtaagagcacagttctgctctaaatattgcaatgcacacaacattatgggagacaaaccagagttcaaaagaggacaaattgttggtgcacgtcttgctggagcatctgtgaccaagacagcaagtatttgtgatgcatcaagagccacggtatccagggtaatgtcagcgagataccaccaagaagcaccaaccacatccaacaggattaactgtggacgctgtaagaggaagctgtctgaaagggatgttcgggtgctaacccggattgtatctgaaaaacataaaaccacggctgatcaaatcacgcagaattcaatgtgcacctcaactctcctgtttccaccagaactgtccgtcaccacaatcaattattgtgctctaaaaccagctgTTTCAGTT

Function

GO:

id name namespace
GO:0010035 response to inorganic substance biological_process
GO:0010038 response to metal ion biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU76991 True 526 TUCP 0.44 1 37005273 37005798

Neighbor

gene id symbol gene type direction distance location
endog endog,LOC107736532 coding upstream 406377 36596016 ~ 36598896 (+)
ntng2 ntng2,ntng2a,LOC108438355,LOC106585788 coding upstream 419861 36493502 ~ 36585412 (+)
LOC103035335 atp2a2,atp2a2a,LOC107757297,LOC108265716 coding upstream 673704 36296278 ~ 36331569 (+)
ift81 ift81,LOC106585468 coding upstream 715472 36262411 ~ 36289801 (+)
LOC103035951 LOC108438364,LOC107598973,LOC107757293 coding upstream 800170 36099455 ~ 36205103 (+)
LOC103040549 NA coding downstream 58601 37064399 ~ 37085499 (+)
LOC111192679 NA coding downstream 80644 37086442 ~ 37091387 (+)
LOC103044321 plekha2,LOC108414546 coding downstream 88916 37094714 ~ 37110794 (+)
LOC103040231 asb13,asb13b,LOC108266053,LOC107734516,LOC107725307,LOC107599049,LOC107664994 coding downstream 105743 37111541 ~ 37115408 (+)
nras nras,LOC107598969,LOC107725308 coding downstream 111621 37117419 ~ 37126020 (+)
G56859 NA non-coding upstream 129926 36807703 ~ 36875347 (+)
G56863 NA non-coding upstream 172227 36825767 ~ 36833046 (+)
G56862 NA non-coding upstream 175783 36827530 ~ 36829490 (+)
G56853 NA non-coding upstream 232402 36770816 ~ 36772871 (+)
G56852 NA non-coding upstream 253632 36749089 ~ 36751641 (+)
G57088 NA non-coding downstream 225192 37230990 ~ 37233036 (+)
G57209 NA non-coding downstream 382291 37388089 ~ 37391366 (+)
G57212 NA non-coding downstream 468198 37473996 ~ 37474778 (+)
G57227 NA non-coding downstream 471434 37477232 ~ 37548787 (+)
G57229 NA non-coding downstream 480573 37486371 ~ 37546259 (+)
G56701 pola2,LOC107710902,LOC107657899 other upstream 1040763 35956104 ~ 35964510 (+)
G56504 NA other upstream 1546396 35420718 ~ 35458877 (+)
LOC103032256 dynll1,LOC103397138,LOC107554284,LOC107559583,LOC100698873 other upstream 1721002 35276079 ~ 35284271 (+)
ikbkb ikbkb,vdac3,LOC107560056,LOC107671013,LOC107754399 other upstream 1732745 35226485 ~ 35272528 (+)
LOC103047498 NA other upstream 2015988 34961800 ~ 34989285 (+)
agtpbp1 agtpbp1 other downstream 2103446 39109244 ~ 39153476 (+)
frmd3 frmd3,LOC107678471 other downstream 2286273 39292071 ~ 39370585 (+)
LOC103039219 iqsec2,LOC107747221,LOC107683900,LOC107702804,LOC108265842 other downstream 2961292 39967090 ~ 40090271 (+)
G57664 NA other downstream 3038855 40044653 ~ 40046467 (+)
G57856 tp73 other downstream 3669242 40675040 ~ 40680555 (+)

Expression


Co-expression Network