G57121 (nras,LOC107598969,LOC107725308)


Basic Information

Item Value
gene id G57121
gene name nras,LOC107598969,LOC107725308
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 37117444 ~ 37207042 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU77074
tttcaatttggtaaaatcaaagaaactcatcatttttaagtggtgtcttacttttttccagagctgtatttaacaattttaacaaGTGTGGGTGGTTGCGTTTTGTagaactgttattttttttgaggGACATTAATAATTACGGTAGCACCAGGCAAAAAACGACTGACAGatctatagatatatagatagataatcTATTAATATAAAGCCACTTCTGACATCACTTATGACAAACTATATGTAAAATCAGGCActgttaaaaacaaacataaaaaacacagatttataacaaaactaaactttaaaaccttaaaaaaaataataaagttggCCCAGGTGATTCTTCTAAAGGCAGTGCACACTTTACACTATTGGGCACGTTTTAGCacagacattaaaaaaacaaaaggtcaCAGAGTGCAGATGACTACAGTTTTTTCACAGTCCTTAATTCATGCATCTCATCGATTGTTTCTGAGCATTACTGAACTCCAGACTCCCACTACTGGCTAAAAACAAGAGATGTCATTTATCTAACTAAAAAAGGCACATTTCTCCTTTTTATGAACGTATTTGAAATAATTAGGCACACAAATTTCATTAagcattcttaagcattaagaATTGGTTCTTGGAGGTTCTGGTGCACGAGTTTCGTCTCGTTTTCTAAGAGCATGTATGTAAAGGCGATCGATTCTCATTCATTTACTGTAGGTTATTTTTTAGCCTTAAATTCCTAAATTTTGCAtgcccaaaaaacaaaacatctacACGAATCAAGctgaaatgtaaaagaaacCGGTGACAGACAATCTGAGGTCAAATAGGTCTaccttaaaaaacaaacaaacaaaagaactacattaaaacaaaaacgcATTAAAGACGCATTAGATGCATTAGAGGCACTTTTACCTTCACAGTATTCCTGAGTACTGAACCTACAGATTAAGATCAAGTCCGATGAGAAATCCGAAAAACAAGGGAAGATGCGAGATCCCAGCACTTAATGACTAAAGAGATAAATGCACGTCTGTGAAAATGATCAGAGGAGCCAAAACGTCCCACATATAAGGCCCCACGTTTCCATCACAGCAGCCGAtacagtccacacacacacacacacacacacacacacagccagcagGCCAGGCTTCGCATTTATCCCTTTTAGCCAGCAGAGGGCAACACCGCAGAAACTCCACGACCCGGCCGAATTCAGGCTACTGTGATTTAAAGCTGAAGCAAAATCTTAACCAATCAGAGAAGCTCTTCAGTCACAAGCGTAAGTCGTAAGTGTTCAGCTGCTGGCCGGTGGGCTTCTGAGGGGGTTCTGGAGGGGGGTGGCGCACGTCCTGATCACATGACCTCACAGGAGACGCCGAGGCAGCCCTGCTTCCTGTCCTCCCTGCTGTTGAGCTTTTTCATGCGATAATGGCGGATCTCCCGAACAAGGGTGTAAAAAGCGTCTTCAACTCCCTGTCGGGTCTTGGCTGAAGTTTCTACAAATTCTATGCCGTAGCTCCTGGCTAGTTCCTGGGCCTGCTTGGTGTCAACAGTTCTGGCCAAATCACATTTGTTTCCCACCAGCACCATCGGCACATCATCAGAGTCCTTCACCCGCTTAATCTGCTCCCTATACAGATGCACATCAGCGAAGGACTTGGTGTTGTTGATGGCGAAGACACAGAGAAAGCCCTCTCCAGTCCTCATGTACTGATCCCTCATAGCACTGTACTCCTCTTGGCCTGCTGTGTCCAGGATGTCCAGTAGACACGTCTCCCCATCGATCACCACCTGCTTCCTGTACGAGTCCTCTATGGTGGGGTCATATTCGTCCACGAAGTGATTCTGGATCAGCTGGATCGTCAGTGCACTCTTCCCAACGCCACCAGctcccaccaccaccagctTGTATTCAGTCATCCTGCAGCTGCCCCTGGCTCACCACTAGAGTCCGCAGtcctcggtctctctctctacctccctctctctctccgtctccccGGCTGGTGTTGCTGCTTTAGCAGTTGCGGTCTGTATAACTCGCCATTCTGGACTCTATCTAACAGCACTCCGCTTCTTTACCGGGGTAAAATGAAGCAGCAGGGAGCCGGTATCCTGTTCTAAAGTGCTGTAGAGCTGAGATCTGTCTGTTCTGGTTTCAGCAGGAGTTCCTAAAGCAAGGTTGAGCTTCCTATTAGATAATTCAGCTGCTCTCTCTGCTTCTGTCTC

Function

symbol description
nras Predicted to enable GDP binding activity; GTP binding activity; and GTPase activity. Predicted to be involved in Ras protein signal transduction. Predicted to act upstream of or within signal transduction. Predicted to be located in Golgi membrane. Predicted to be active in plasma membrane. Is expressed in brain; heart; liver; pleuroperitoneal region; and trunk musculature. Human ortholog(s) of this gene implicated in several diseases, including Noonan syndrome 6; autoimmune lymphoproliferative syndrome type 4; endocrine gland cancer (multiple); hematologic cancer (multiple); and reproductive organ cancer (multiple). Orthologous to human NRAS (NRAS proto-oncogene, GTPase).

NR:

description
GTPase NRas

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU77074 True 2238 lncRNA 0.44 6 37117444 37207042

Neighbor

gene id symbol gene type direction distance location
slc2a6 slc2a6,LOC107599026 coding downstream 55746 37050720 ~ 37061698 (-)
LOC107197187 NA coding downstream 68828 37043801 ~ 37048616 (-)
LOC103045252 LOC108438351 coding downstream 299233 36796730 ~ 36818211 (-)
LOC103045561 phf19,LOC107557185,LOC107599052,LOC106585785 coding downstream 339134 36755166 ~ 36778310 (-)
LOC103045855 LOC108438352,LOC108265896 coding downstream 475881 36605407 ~ 36641563 (-)
LOC111192681 si:ch211-240g9.1,LOC108438565,LOC108264952,LOC107598959,LOC107653411,LOC105925911,LOC100700110 coding upstream 183400 37390442 ~ 37476012 (-)
tbc1d22b tbc1d22b,LOC108438566,LOC107653399,LOC107674367,LOC107734531 coding upstream 340717 37547759 ~ 37599298 (-)
LOC103031835 pim1,LOC103031835,LOC108438567,LOC107584899,LOC107598956,LOC107734527,LOC108265925,LOC107674355,LOC107725309 coding upstream 424015 37631057 ~ 37635455 (-)
LOC103047788 NA coding upstream 601506 37808548 ~ 37842410 (-)
kcnd1 kcnd1,LOC107584898,LOC107601760 coding upstream 646738 37853780 ~ 37958375 (-)
G57107 NA non-coding downstream 59356 37043327 ~ 37058088 (-)
G57043 NA non-coding downstream 278192 36825767 ~ 36839252 (-)
G57012 NA non-coding downstream 514016 36600038 ~ 36603428 (-)
G57010 NA non-coding downstream 704695 36411235 ~ 36412749 (-)
G57013 NA non-coding downstream 708992 36408175 ~ 36408452 (-)
G57166 trim33 non-coding upstream 23156 37230198 ~ 37237667 (-)
G57176 pqlc2 non-coding upstream 33613 37240655 ~ 37245381 (-)
G57178 NA non-coding upstream 42818 37249860 ~ 37253799 (-)
G57199 NA non-coding upstream 96828 37303870 ~ 37304244 (-)
G57201 NA non-coding upstream 101627 37308669 ~ 37309114 (-)
LOC111192678 phf19 other downstream 325000 36785308 ~ 36792444 (-)
LOC107196826 LOC108438352,LOC106580127,LOC108265896,LOC106585786 other downstream 370810 36680166 ~ 36746634 (-)
G57014 NA other downstream 714146 36402850 ~ 36403298 (-)
G56987 atp2a2,atp2a2a,LOC108265716,LOC107580452 other downstream 796749 36319056 ~ 36320695 (-)
LOC103023491 fnbp1,LOC107599022,LOC108264955 other downstream 855899 36226129 ~ 36261545 (-)
brpf3 brpf3,LOC108265695 other upstream 74071 37281113 ~ 37299607 (-)
LOC103043112 LOC108438563,LOC108265696,LOC107725303,LOC107653398,LOC107598961,LOC107674288,LOC107734522,LOC107570980,LOC105889772 other upstream 95005 37302047 ~ 37326736 (-)
LOC111192682 NA other upstream 1054075 38261117 ~ 38305466 (-)
LOC103030299 fkbp1aa,fkb1b,fkbp1a,LOC103030299,LOC107553142,LOC107574256,LOC107752559,LOC107707744 other upstream 2314502 39521544 ~ 39562921 (-)
G57727 kdm5c,LOC107550909,LOC107747206,LOC107570512 other upstream 2910747 40117789 ~ 40119095 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_036236 nras coding NC_007119.7 CM002892.2 11114754 ~ 11131695 (-)
grasscarp (Ctenopharyngodon idella) CI01000010_07649121_07654390 HRAS, NRAS, HRASB, HRASA, RASH, KRAS coding CI01000010 null 7649121 ~ 7654734 (+)