LOC103030299 (fkbp1aa,fkb1b,fkbp1a,LOC103030299,LOC107553142,LOC107574256,LOC107752559,LOC107707744)


Basic Information

Item Value
gene id LOC103030299
gene name fkbp1aa,fkb1b,fkbp1a,LOC103030299,LOC107553142,LOC107574256,LOC107752559,LOC107707744
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035902.1
NCBI id CM008305.1
chromosome length 52532229
location 39521544 ~ 39562921 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU77625
AGCagatgtgtgtgagtgggtgatTCTGGGACACAAGCTCAACCTTTATGTCTAGAATCACAATTACTGGATTGTACAGAGCGCATTTTGTGCAGAGACCCGGGAGAAGAGACGCGAACAACGAGTCAGGATGGGAGTCGAGGTCGAGACGATAACTCCTGGAGACGgaAGTACTTTCCCCAAGAAAGGACAGACGTGCGTCGTGCACTATGTCGGGTCTCTGACGGACGGACGCAAGTTTGACTCCTCTCGGGACCGAGGCAAACCCTTCAAATTCAAGATTGGCAAGCAGGAAGTGATCCGTGGTTGGGATGAAGGAGTGGCCCAGATGAGCGTAGGACAGCGTGCAAAGCTGACCTGCACTCCGGACTTTGCTTATGGGAGCAAAGGCCACCCTGGCATCATCCCTCCCAATGCCACCCTCATATTTGATGTGGAGCTCCTTGGCTTGGAGTAAAAGCTCTGCGGTCCAACTCAGGTTTTTCCCTATTTGTTCTTTCAGGGTCGACCTTTTTGGGGAACATGGACTCCTGCTCGTGGTCCTCGAAAGGGGCTAGTGTCGATAGCTATACCACTTAGCTTAGCTCTGTAATCCATGTGTATATTTTGTTACCTTTTCATTCCTTTCCTGTTAGACATGACCGATGGAATGCTCTCACCCACTGGATGTTTgcctctcttttttcccctcctttctGCTTCCTTTTTTGTATTTGATTTCTGCATTGTGAACATGATCATTGCGACAGGGCTTTGGCTGAGCTGGTAGTCTGTACTCTGGTGGGGAAATTTGGATAATTATGAAACAATAAACT
>TU77626
AGCagatgtgtgtgagtgggtgatTCTGGGACACAAGCTCAACCTTTATGTCTAGAATCACAATTACTGGATTGTACAGAGCGCATTTTGTGCAGAGACCCGGGAGAAGAGACGCGAACAACGAGTCAGGATGGGAGTCGAGGTCGAGACGATAACTCCTGGAGACGgaAGTACTTTCCCCAAGAAAGGACAGACGTGCGTCGTGCACTATGTCGGGTCTCTGACGGACGGACGCAAGTTTGACTCCTCTCGGGACCGAGGCAAACCCTTCAAATTCAAGATTGGCAAGCAGGAAGTGATCCGTGGTTGGGATGAAGGAGTGGCCCAGATGAGCGTAGGACAGCGTGCAAAGCTGACCTGCACTCCGGACTTTGCTTATGGGAGCAAAGGCCACCCTGGCATCATCCCTCCCAATGCCACCCTCATATTTGATGTGGAGCTCCTTGGCTTGGAGTAAAAGCTCTGCGGTCCAACTCAGGTTTTTCCCTATTTGTTCTTTCAGGGTCGACCTTTTTGGGGAACATGGACTCCTGCTCGTGGTCCTCGAAAGGGGCTAGTGTCGATAGCTATACCACTTAGCTTAGCTCTGTAATCCATGTGTATATTTTGTTACCTTTTCATTCCTTTCCTGTTAGACATGACCGATGGAATGCTCTCACCCACTGGATGTTTgcctctcttttttcccctcctttctGCTTCCTTTTTTGTATTTGATTTCTGCATTGTGAACATGATCATTGCGACAGGGCTTTGGCTGAGCTGGTAGTCTGTACTCTGGTGGGGAAATTTGGATAATTATGAAACAATAAACTACttgaaaataaacattgtttataaAAAGACAACaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
>TU77628
AGCagatgtgtgtgagtgggtgatTCTGGGACACAAGCTCAACCTTTATGTCTAGAATCACAATTACTGGATTGTACAGAGCGCATTTTGTGCAGAGACCCGGGAGAAGAGACGCGAACAACGAGTCAGGATGGGAGTCGAGGTCGAGACGATAACTCCTGGAGACGgaAGTACTTTCCCCAAGAAAGGACAGACGTGCGTCGTGCACTATGTCGGGTCTCTGACGGACGGACGCAAGTTTGACTCCTCTCGGGACCGAGGCAAACCCTTCAAATTCAAGATTGGCAAGCAGGAAGTGATCCGTGGTTGGGATGAAGGAGTGGCCCAGATGAGCGTAGGACAGCGTGCAAAGCTGACCTGCACTCCGGACTTTGCTTATGGGAGCAAAGGCCACCCTGGCATCATCCCTCCCAATGCCACCCTCATATTTGATGTGGAGCTCCTTGGCTTGGAGTAAAAGCTCTGCGGTCCAACTCAGGTTTTTCCCTATTTGTTCTTTCAGGGTCGACCTTTTTGGGGAACATGGACTCCTGCTCGTGGTCCTCGAAAGGGGCTAGTGTCGATAGCTATACCACTTAGCTTAGCTCTGTAATCCATGTGTATATTTTGTTACCTTTTCATTCCTTTCCTGTTAGACATGACCGATGGAATGCTCTCACCCACTGGATGTTTgcctctcttttttcccctcctttctGCTTCCTTTTTTGTATTTGATTTCTGCATTGTGAACATGATCATTGCGACAGGGCTTTGGCTGAGCTGGTAGTCTGTACTCTGGTGGGGAAATTTGGATAATTATGAAACAATAAACTACttgaaaataaacattgtttataaAAAGACAAaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
>TU77629
AGCagatgtgtgtgagtgggtgatTCTGGGACACAAGCTCAACCTTTATGTCTAGAATCACAATTACTGGATTGTACAGAGCGCATTTTGTGCAGAGACCCGGGAGAAGAGACGCGAACAACGAGTCAGGATGGGAGTCGAGGTCGAGACGATAACTCCTGGAGACGgaAGTACTTTCCCCAAGAAAGGACAGACGTGCGTCGTGCACTATGTCGGGTCTCTGACGGACGGACGCAAGTTTGACTCCTCTCGGGACCGAGGCAAACCCTTCAAATTCAAGATTGGCAAGCAGGAAGTGATCCGTGGTTGGGATGAAGGAGTGGCCCAGATGAGCGTAGGACAGCGTGCAAAGCTGACCTGCACTCCGGACTTTGCTTATGGGAGCAAAGGCCACCCTGGCATCATCCCTCCCAATGCCACCCTCATATTTGATGTGGAGCTCCTTGGCTTGGAGTAAAAGCTCTGCGGTCCAACTCAGGTTTTTCCCTATTTGTTCTTTCAGGGTCGACCTTTTTGGGGAACATGGACTCCTGCTCGTGGTCCTCGAAAGGGGCTAGTGTCGATAGCTATACCACTTAGCTTAGCTCTGTAATCCATGTGTATATTTTGTTACCTTTTCATTCCTTTCCTGTTAGACATGACCGATGGAATGCTCTCACCCACTGGATGTTTgcctctcttttttcccctcctttctGCTTCCTTTTTTGTATTTGATTTCTGCATTGTGAACATGATCATTGCGACAGGGCTTTGGCTGAGCTGGTAGTCTGTACTCTGGTGGGGAAATTTGGATAATTATGAAACAATAAACTACttgaaaataaacattgtttataaAAAGACAAaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
>TU77630
AGCagatgtgtgtgagtgggtgatTCTGGGACACAAGCTCAACCTTTATGTCTAGAATCACAATTACTGGATTGTACAGAGCGCATTTTGTGCAGAGACCCGGGAGAAGAGACGCGAACAACGAGTCAGGATGGGAGTCGAGGTCGAGACGATAACTCCTGGAGACGgaAGTACTTTCCCCAAGAAAGGACAGACGTGCGTCGTGCACTATGTCGGGTCTCTGACGGACGGACGCAAGTTTGACTCCTCTCGGGACCGAGGCAAACCCTTCAAATTCAAGATTGGCAAGCAGGAAGTGATCCGTGGTTGGGATGAAGGAGTGGCCCAGATGAGCGTAGGACAGCGTGCAAAGCTGACCTGCACTCCGGACTTTGCTTATGGGAGCAAAGGCCACCCTGGCATCATCCCTCCCAATGCCACCCTCATATTTGATGTGGAGCTCCTTGGCTTGGAGTAAAAGCTCTGCGGTCCAACTCAGGTCGACCTTTTTGGGGAACATGGACTCCTGCTCGTGGTCCTCGAAAGGGGCTAGTGTCGATAGCTATACCACTTAGCTTAGCTCTGTAATCCATGTGTATATTTTGTTACCTTTTCATTCCTTTCCTGTTAGACATGACCGATGGAATGCTCTCACCCACTGGATGTTTgcctctcttttttcccctcctttctGCTTCCTTTTTTGTATTTGATTTCTGCATTGTGAACATGATCATTGCGACAGGGCTTTGGCTGAGCTGGTAGTCTGTACTCTGGTGGGGAAATTTGGATAATTATGAAACAATAAACTACttgaaaataaacattgtttataaAAAGAaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
>TU77631
AGCagatgtgtgtgagtgggtgatTCTGGGACACAAGCTCAACCTTTATGTCTAGAATCACAATTACTGGATTGTACAGAGCGCATTTTGTGCAGAGACCCGGGAGAAGAGACGCGAACAACGAGTCAGGATGGGAGTCGAGGTCGAGACGATAACTCCTGGAGACGgaAGTACTTTCCCCAAGAAAGGACAGACGTGCGTCGTGCACTATGTCGGGTCTCTGACGGACGGACGCAAGTTTGACTCCTCTCGGGACCGAGGCAAACCCTTCAAATTCAAGATTGGCAAGCAGGAAGTGATCCGTGGTTGGGATGAAGGAGTGGCCCAGATGAGCGTAGGACAGCGTGCAAAGCTGACCTGCACTCCGGACTTTGCTTATGGGAGCAAAGGCCACCCTGGCATCATCCCTCCCAATGCCACCCTCATATTTGATGTGGAGCTCCTTGGCTTGGAGTAAAAGCTCTGCGGTCCAACTCAGGTTTTTCCCTATTTGTTCTTTCAGGGTCGACCTTTTTGGGGAACATGGACTCCTGCTCGTGGTCCTCGAAAGGGGCTAGTGTCGATAGCTATACCACTTAGCTTAGCTCTGTAATCCATGTGTATATTTTGTTACCTTTTCATTCCTTTCCTGTTAGACATGACCGATGGAATGCTCTCACCCACTGGATGTTTgcctctcttttttcccctcctttctGCTTCCTTTTTTGTATTTGATTTCTGCATTGTGAACATGATCATTGCGACAGGGCTTTGGCTGAGCTGGTAGTCTGTACTCTGGTGGGGAAATTTGGATAATTATGAAACAATAAACTACttgaaaataaacattgtttataaAAAGACAAaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
>TU77632
AGCagatgtgtgtgagtgggtgatTCTGGGACACAAGCTCAACCTTTATGTCTAGAATCACAATTACTGGATTGTACAGAGCGCATTTTGTGCAGAGACCCGGGAGAAGAGACGCGAACAACGAGTCAGGATGGGAGTCGAGGTCGAGACGATAACTCCTGGAGACGgaAGTACTTTCCCCAAGAAAGGACAGACGTGCGTCGTGCACTATGTCGGGTCTCTGACGGACGGACGCAAGTTTGACTCCTCTCGGGACCGAGGCAAACCCTTCAAATTCAAGATTGGCAAGCAGGAAGTGATCCGTGGTTGGGATGAAGGAGTGGCCCAGATGAGCGTAGGACAGCGTGCAAAGCTGACCTGCACTCCGGACTTTGCTTATGGGAGCAAAGGCCACCCTGGCATCATCCCTCCCAATGCCACCCTCATATTTGATGTGGAGCTCCTTGGCTTGGAGTAAAAGCTCTGCGGTCCAACTCAGGTCGACCTTTTTGGGGAACATGGACTCCTGCTCGTGGTCCTCGAAAGGGGCTAGTGTCGATAGCTATACCACTTAGCTTAGCTCTGTAATCCATGTGTATATTTTGTTACCTTTTCATTCCTTTCCTGTTAGACATGACCGATGGAATGCTCTCACCCACTGGATGTTTgcctctcttttttcccctcctttctGCTTCCTTTTTTGTATTTGATTTCTGCATTGTGAACATGATCATTGCGACAGGGCTTTGGCTGAGCTGGTAGTCTGTACTCTGGTGGGGAAATTTGGATAATTATGAAACAATAAACTACttgaaaataaacattgtttataaAAAGAaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
>TU77633
AGCagatgtgtgtgagtgggtgatTCTGGGACACAAGCTCAACCTTTATGTCTAGAATCACAATTACTGGATTGTACAGAGCGCATTTTGTGCAGAGACCCGGGAGAAGAGACGCGAACAACGAGTCAGGATGGGAGTCGAGGTCGAGACGATAACTCCTGGAGACGgaAGTACTTTCCCCAAGAAAGGACAGACGTGCGTCGTGCACTATGTCGGGTCTCTGACGGACGGACGCAAGTTTGACTCCTCTCGGGACCGAGGCAAACCCTTCAAATTCAAGATTGGCAAGCAGGAAGTGATCCGTGGTTGGGATGAAGGAGTGGCCCAGATGAGCGTAGGACAGCGTGCAAAGCTGACCTGCACTCCGGACTTTGCTTATGGGAGCAAAGGCCACCCTGGCATCATCCCTCCCAATGCCACCCTCATATTTGATGTGGAGCTCCTTGGCTTGGAGTAAAAGCTCTGCGGTCCAACTCAGGTCGACCTTTTTGGGGAACATGGACTCCTGCTCGTGGTCCTCGAAAGGGGCTAGTGTCGATAGCTATACCACTTAGCTTAGCTCTGTAATCCATGTGTATATTTTGTTACCTTTTCATTCCTTTCCTGTTAGACATGACCGATGGAATGCTCTCACCCACTGGATGTTTgcctctcttttttcccctcctttctGCTTCCTTTTTTGTATTTGATTTCTGCATTGTGAACATGATCATTGCGACAGGGCTTTGGCTGAGCTGGTAGTCTGTACTCTGGTGGGGAAATTTGGATAATTATGAAACAATAAACTACttgaaaataaacattgtttataaAAAGACAAaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
>XM_007238038.3
CTCCCCGGCGGGAAACGCGCCGCTAGGGGGAGCagatgtgtgtgagtgggtgatTCTGGGACACAAGCTCAACCTTTATGTCTAGAATCACAATTACTGGATTGTACAGAGCGCATTTTGTGCAGAGACCCGGGAGAAGAGACGCGAACAACGAGTCAGGATGGGAGTCGAGGTCGAGACGATAACTCCTGGAGACGgaAGTACTTTCCCCAAGAAAGGACAGACGTGCGTCGTGCACTATGTCGGGTCTCTGACGGACGGACGCAAGTTTGACTCCTCTCGGGACCGAGGCAAACCCTTCAAATTCAAGATTGGCAAGCAGGAAGTGATCCGTGGTTGGGATGAAGGAGTGGCCCAGATGAGCGTAGGACAGCGTGCAAAGCTGACCTGCACTCCGGACTTTGCTTATGGGAGCAAAGGCCACCCTGGCATCATCCCTCCCAATGCCACCCTCATATTTGATGTGGAGCTCCTTGGCTTGGAGTAAAAGCTCTGCGGTCCAACTCAGGTTTTTCCCTATTTGTTCTTTCAGGGTCGACCTTTTTGGGGAACATGGACTCCTGCTCGTGGTCCTCGAAAGGGGCTAGTGTCGATAGCTATACCACTTAGCTTAGCTCTGTAATCCATGTGTATATTTTGTTACCTTTTCATTCCTTTCCTGTTAGACATGACCGATGGAATGCTCTCACCCACTGGATGTTTgcctctcttttttcccctcctttctGCTTCCTTTTTTGTATTTGATTTCTGCATTGTGAACATGATCATTGCGACAGGGCTTTGGCTGAGCTGGTAGTCTGTACTCTGGTGGGGAAATTTGGATAATTATGAAACAATAAACTACttgaaaataaacattgtttataaAAAGACAA
>XM_007238039.2
CTCCCCGGCGGGAAACGCGCCGCTAGGGGGAGCagatgtgtgtgagtgggtgatTCTGGGACACAAGCTCAACCTTTATGTCTAGAATCACAATTACTGGATTGTACAGAGCGCATTTTGTGCAGAGACCCGGGAGAAGAGACGCGAACAACGAGTCAGGATGGGAGTCGAGGTCGAGACGATAACTCCTGGAGACGgaAGTACTTTCCCCAAGAAAGGACAGACGTGCGTCGTGCACTATGTCGGGTCTCTGACGGACGGACGCAAGTTTGACTCCTCTCGGGACCGAGGCAAACCCTTCAAATTCAAGATTGGCAAGCAGGAAGTGATCCGTGGTTGGGATGAAGGAGTGGCCCAGATGAGCGTAGGACAGCGTGCAAAGCTGACCTGCACTCCGGACTTTGCTTATGGGAGCAAAGGCCACCCTGGCATCATCCCTCCCAATGCCACCCTCATATTTGATGTGGAGCTCCTTGGCTTGGAGTAAAAGCTCTGCGGTCCAACTCAGGTCGACCTTTTTGGGGAACATGGACTCCTGCTCGTGGTCCTCGAAAGGGGCTAGTGTCGATAGCTATACCACTTAGCTTAGCTCTGTAATCCATGTGTATATTTTGTTACCTTTTCATTCCTTTCCTGTTAGACATGACCGATGGAATGCTCTCACCCACTGGATGTTTgcctctcttttttcccctcctttctGCTTCCTTTTTTGTATTTGATTTCTGCATTGTGAACATGATCATTGCGACAGGGCTTTGGCTGAGCTGGTAGTCTGTACTCTGGTGGGGAAATTTGGATAATTATGAAACAATAAACTACttgaaaataaacattgtttataaAAAGACAA

Function

symbol description
fkbp1aa Predicted to enable peptidyl-prolyl cis-trans isomerase activity. Predicted to be involved in chaperone-mediated protein folding and protein peptidyl-prolyl isomerization. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in Graves' disease. Orthologous to human FKBP1A (FKBP prolyl isomerase 1A) and FKBP1B (FKBP prolyl isomerase 1B).
fkbp1a Enables several functions, including FK506 binding activity; activin binding activity; and peptidyl-prolyl cis-trans isomerase activity. Involved in several processes, including SMAD protein complex assembly; regulation of protein metabolic process; and regulation of transmembrane receptor protein serine/threonine kinase signaling pathway. Located in Z disc; cytosol; and membrane.

NR:

description
peptidyl-prolyl cis-trans isomerase FKBP1A

GO:

id name namespace
GO:0000413 protein peptidyl-prolyl isomerization biological_process
GO:0006457 protein folding biological_process
GO:0033017 sarcoplasmic reticulum membrane cellular_component
GO:0005528 FK506 binding molecular_function
GO:0003755 peptidyl-prolyl cis-trans isomerase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU77625 False 815 TUCP 0.49 5 39560460 39562891
TU77626 True 880 TUCP 0.46 6 39521544 39562891
TU77628 False 878 TUCP 0.46 6 39521544 39562891
TU77629 False 879 TUCP 0.46 6 39521544 39562891
TU77630 False 851 TUCP 0.46 6 39521544 39562891
TU77631 False 877 TUCP 0.46 6 39521544 39562891
TU77632 False 850 TUCP 0.46 6 39521544 39562891
TU77633 False 854 TUCP 0.46 6 39521544 39562891
XM_007238038.3 False 878 mRNA 0.49 5 39560427 39562921
XM_007238039.2 False 853 mRNA 0.49 5 39560427 39562921

Neighbor

gene id symbol gene type direction distance location
rasef rasef coding downstream 121452 39375789 ~ 39400092 (-)
rmi1 NA coding downstream 264109 39251721 ~ 39257435 (-)
ntrk2 ntrk2,ntrk2a,LOC107752549,LOC107678451,LOC107757434 coding downstream 273124 39167794 ~ 39248420 (-)
naa35 naa35 coding downstream 411430 39093356 ~ 39110114 (-)
LOC103028719 sorbs3,LOC108265711 coding downstream 1050121 38410802 ~ 38471423 (-)
LOC103029445 NA coding upstream 4354 39567275 ~ 39586053 (-)
LOC103028930 NA coding upstream 25096 39588017 ~ 39595275 (-)
prickle3 LOC108426739 coding upstream 48849 39611770 ~ 39677475 (-)
plp2 LOC108426740 coding upstream 123810 39686731 ~ 39718203 (-)
LOC103028093 syp,sypb,LOC108426646,LOC107678440,LOC107553146 coding upstream 166167 39729088 ~ 39755603 (-)
G57560 frmd3 non-coding downstream 153835 39363085 ~ 39367709 (-)
G57447 NA non-coding downstream 295952 39224941 ~ 39225592 (-)
G57450 NA non-coding downstream 368193 39151918 ~ 39153351 (-)
G57452 agtpbp1,LOC106580090 non-coding downstream 370723 39143116 ~ 39150821 (-)
G57374 NA non-coding downstream 1268624 38252647 ~ 38252920 (-)
G57623 NA non-coding upstream 156510 39719431 ~ 39721612 (-)
G57671 pqbp1 non-coding upstream 259760 39822681 ~ 39829352 (-)
LOC111192684 NA non-coding upstream 349199 39912120 ~ 39967320 (-)
G57704 LOC108442091 non-coding upstream 424563 39987484 ~ 40090251 (-)
G57729 kdm5c non-coding upstream 558564 40121485 ~ 40124946 (-)
LOC111192682 NA other downstream 1216078 38261117 ~ 38305466 (-)
LOC103043112 LOC108438563,LOC108265696,LOC107725303,LOC107653398,LOC107598961,LOC107674288,LOC107734522,LOC107570980,LOC105889772 other downstream 2194808 37302047 ~ 37326736 (-)
brpf3 brpf3,LOC108265695 other downstream 2221937 37281113 ~ 37299607 (-)
LOC111192678 phf19 other downstream 2729100 36785308 ~ 36792444 (-)
LOC107196826 LOC108438352,LOC106580127,LOC108265896,LOC106585786 other downstream 2774910 36680166 ~ 36746634 (-)
G57727 kdm5c,LOC107550909,LOC107747206,LOC107570512 other upstream 554868 40117789 ~ 40119095 (-)
LOC103037008 LOC108442081,LOC105022382,LOC106567250 other upstream 602479 40165400 ~ 40179141 (-)
tprg1l tprg1l,LOC107710788,LOC107678419,LOC107698845,LOC106513028 other upstream 1185820 40748741 ~ 40756014 (-)
G58022 LOC103032860,LOC108432146 other upstream 1833165 41396086 ~ 41398478 (-)
G58435 aaas other upstream 3539949 43102870 ~ 43107623 (-)

Expression


Co-expression Network